Feature identity
- Identifier
- PaHa08g16100.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 582 bp
- Genomic location
- 8:48,640,704–48,650,513
- Strand
- +
Hass · mRNA
PaHa08g16100.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 582
- bp
- 8:48,640,704–48,650,513
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g16100
- eggNOG
- Preferred name: MED15A | Seed ortholog: 337451.A0A3S3N1I4 | eggNOG OG: KIX_2@131567|C-2, KIX_2@3193|Eg-11, KIX_2@58023|GS-12
- Gene Ontology
- GO:0003713 transcription coactivator activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0009751 response to salicylic acid; GO:0016592 mediator complex; GO:0031490 chromatin DNA binding; GO:0045723 positive regulation of fatty acid biosynthetic process
- KEGG
- EC: ec:2.3.1.48, ec:2.7.11.22 | KO: K14972 | Pathway: 03083, 03250 | BRITE: 00001, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g16100.1-protein
derives_frommRNAPaHa08g16100.1
mRNAPaHa08g16100.1
part_ofgenePaHa08g16100
CDS
part_ofPaHa08g16100.1-CDS-8-1787993825:48640704..48640847mRNAPaHa08g16100.1
CDS
part_ofPaHa08g16100.1-CDS-8-1787993825:48642151..48642251mRNAPaHa08g16100.1
CDS
part_ofPaHa08g16100.1-CDS-8-1787993825:48642929..48643096mRNAPaHa08g16100.1
CDS
part_ofPaHa08g16100.1-CDS-8-1787993825:48650247..48650358mRNAPaHa08g16100.1
CDS
part_ofPaHa08g16100.1-CDS-8-1787993825:48650457..48650513mRNAPaHa08g16100.1
exon
part_ofPaHa08g16100.1-exon-8-1787993825:48640704..48640847mRNAPaHa08g16100.1
exon
part_ofPaHa08g16100.1-exon-8-1787993825:48642151..48642251mRNAPaHa08g16100.1
exon
part_ofPaHa08g16100.1-exon-8-1787993825:48642929..48643096mRNAPaHa08g16100.1
exon
part_ofPaHa08g16100.1-exon-8-1787993825:48650247..48650358mRNAPaHa08g16100.1
exon
part_ofPaHa08g16100.1-exon-8-1787993825:48650457..48650513mRNAPaHa08g16100.1
