Feature identity
- Identifier
- PaHa01g25700.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,470 bp
- Genomic location
- 1:69,413,807–69,430,379
- Strand
- +
Hass · mRNA
PaHa01g25700.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,470
- bp
- 1:69,413,807–69,430,379
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g25700
- eggNOG
- Preferred name: LOC101490506 | Seed ortholog: 337451.A0A443NP36 | COG: COG0304 | eggNOG OG: Ketoacyl-synt_C@131567|AuB-25!, Ketoacyl-synt_C@3193|UGY-48, ketoacyl-synt@131567|Mjs-60, ketoacyl-synt@58023|Vor-78
- Gene Ontology
- GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity; GO:0005829 cytosol; GO:0006633 fatty acid biosynthetic process; GO:0006636 unsaturated fatty acid biosynthetic process; GO:0009507 chloroplast; GO:0009536 plastid; GO:0009570 chloroplast stroma; GO:0009631 cold acclimation; GO:0009793 embryo development ending in seed dormancy
- KEGG
- EC: ec:2.3.1.179 | KO: K09458 | Pathway: 00061, 00780, 01100, 01212, 01240 | Module: M00083, M00572, M00873, M00874 | BRITE: 00001, 01000, 01004
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g25700.1-protein
derives_frommRNAPaHa01g25700.1
mRNAPaHa01g25700.1
part_ofgenePaHa01g25700
CDS
part_ofPaHa01g25700.1-CDS-1-1787993825:69413807..69413960mRNAPaHa01g25700.1
CDS
part_ofPaHa01g25700.1-CDS-1-1787993825:69414276..69414634mRNAPaHa01g25700.1
CDS
part_ofPaHa01g25700.1-CDS-1-1787993825:69415100..69415531mRNAPaHa01g25700.1
CDS
part_ofPaHa01g25700.1-CDS-1-1787993825:69427866..69428039mRNAPaHa01g25700.1
CDS
part_ofPaHa01g25700.1-CDS-1-1787993825:69429133..69429246mRNAPaHa01g25700.1
CDS
part_ofPaHa01g25700.1-CDS-1-1787993825:69429785..69429886mRNAPaHa01g25700.1
CDS
part_ofPaHa01g25700.1-CDS-1-1787993825:69429992..69430058mRNAPaHa01g25700.1
CDS
part_ofPaHa01g25700.1-CDS-1-1787993825:69430312..69430379mRNAPaHa01g25700.1
exon
part_ofPaHa01g25700.1-exon-1-1787993825:69413807..69413960mRNAPaHa01g25700.1
exon
part_ofPaHa01g25700.1-exon-1-1787993825:69414276..69414634mRNAPaHa01g25700.1
exon
part_ofPaHa01g25700.1-exon-1-1787993825:69415100..69415531mRNAPaHa01g25700.1
exon
part_ofPaHa01g25700.1-exon-1-1787993825:69427866..69428039mRNAPaHa01g25700.1
exon
part_ofPaHa01g25700.1-exon-1-1787993825:69429133..69429246mRNAPaHa01g25700.1
exon
part_ofPaHa01g25700.1-exon-1-1787993825:69429785..69429886mRNAPaHa01g25700.1
exon
part_ofPaHa01g25700.1-exon-1-1787993825:69429992..69430058mRNAPaHa01g25700.1
exon
part_ofPaHa01g25700.1-exon-1-1787993825:69430312..69430379mRNAPaHa01g25700.1
