Feature identity
- Identifier
- PaHa08g13990.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 981 bp
- Genomic location
- 8:43,083,226–43,092,778
- Strand
- −
Hass · mRNA
PaHa08g13990.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 981
- bp
- 8:43,083,226–43,092,778
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g13990
- eggNOG
- Preferred name: CS4 | Seed ortholog: 337451.A0A3S3PA03 | COG: S | eggNOG OG: Methyltransf_7@131567|A-1, Methyltransf_7@3398|FA-12, Methyltransf_7@35493|AA-7
- Gene Ontology
- GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006633 fatty acid biosynthetic process; GO:0006952 defense response; GO:0008757 S-adenosylmethionine-dependent methyltransferase activity; GO:0009611 response to wounding; GO:0051707 response to other organism; GO:0052624 2-phytyl-1,4-naphthoquinone methyltransferase activity; GO:0080150 S-adenosyl-L-methionine:benzoic acid carboxyl methyl transferase activity; GO:0102741 caffeine synthase activity
- KEGG
- EC: ec:2.1.1.158, ec:2.1.1.159, ec:2.1.1.160, ec:2.1.1.273, ec:2.1.1.274 | KO: K12729, K12730, K12731, K21482, K21483, K21484 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g13990.1-protein
derives_frommRNAPaHa08g13990.1
mRNAPaHa08g13990.1
part_ofgenePaHa08g13990
CDS
part_ofPaHa08g13990.1-CDS-8-1787993825:43083226..43083519mRNAPaHa08g13990.1
CDS
part_ofPaHa08g13990.1-CDS-8-1787993825:43083747..43084151mRNAPaHa08g13990.1
CDS
part_ofPaHa08g13990.1-CDS-8-1787993825:43091084..43091295mRNAPaHa08g13990.1
CDS
part_ofPaHa08g13990.1-CDS-8-1787993825:43092709..43092778mRNAPaHa08g13990.1
exon
part_ofPaHa08g13990.1-exon-8-1787993825:43083226..43083519mRNAPaHa08g13990.1
exon
part_ofPaHa08g13990.1-exon-8-1787993825:43083747..43084151mRNAPaHa08g13990.1
exon
part_ofPaHa08g13990.1-exon-8-1787993825:43091084..43091295mRNAPaHa08g13990.1
exon
part_ofPaHa08g13990.1-exon-8-1787993825:43092709..43092778mRNAPaHa08g13990.1
