Feature identity
- Identifier
- Pa11g0247.1-protein
- Feature type
- polypeptide
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 2,262 aa
- Genomic location
- Pa11:4,959,873–5,001,170
- Strand
- +
West Indian T2T · polypeptide
Pa11g0247.1-protein
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,262
- aa
- Pa11:4,959,873–5,001,170
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa11g0247
- eggNOG
- Preferred name: MED12 | Seed ortholog: 337451.A0A3S3NB75 | COG: S | eggNOG OG: Med12@2759|A-1
- Gene Ontology
- GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0003674 molecular_function; GO:0003682 chromatin binding; GO:0003700 DNA-binding transcription factor activity; GO:0003712 transcription coregulator activity; GO:0003713 transcription coactivator activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0040034 regulation of development, heterochronic; GO:0042809 nuclear vitamin D receptor binding; GO:0046966 nuclear thyroid hormone receptor binding; GO:0061630 ubiquitin protein ligase activity; GO:0090213 regulation of radial pattern formation; GO:0140585 promoter-enhancer loop anchoring activity; GO:0140587 chromatin loop anchoring activity
- KEGG
- KO: K15162, K15163, K17433 | Pathway: 04919 | BRITE: 00001, 01610, 03011, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa11g0247.1-protein
derives_frommRNAPa11g0247.1
