Feature identity
- Identifier
- PaHa08g11870.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 636 bp
- Genomic location
- 8:35,052,688–35,058,596
- Strand
- −
Hass · mRNA
PaHa08g11870.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 636
- bp
- 8:35,052,688–35,058,596
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g11870
- eggNOG
- Preferred name: LOC110803261 | Seed ortholog: 337451.A0A443PCY5 | COG: S | eggNOG OG: CBF@131567|A-1*, CBF@2759|F-3, NOC3p@2759|A-1
- Gene Ontology
- GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005730 nucleolus; GO:0006267 pre-replicative complex assembly involved in nuclear cell cycle DNA replication; GO:0006270 DNA replication initiation; GO:0006364 rRNA processing; GO:0007517 muscle organ development; GO:0008150 biological_process; GO:0009410 response to xenobiotic stimulus; GO:0019216 regulation of lipid metabolic process; GO:0042273 ribosomal large subunit biogenesis; GO:0045444 fat cell differentiation
- KEGG
- KO: K14834 | BRITE: 00001, 03009
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g11870.1-protein
derives_frommRNAPaHa08g11870.1
mRNAPaHa08g11870.1
part_ofgenePaHa08g11870
CDS
part_ofPaHa08g11870.1-CDS-8-1787993825:35052688..35052811mRNAPaHa08g11870.1
CDS
part_ofPaHa08g11870.1-CDS-8-1787993825:35052951..35053030mRNAPaHa08g11870.1
CDS
part_ofPaHa08g11870.1-CDS-8-1787993825:35056906..35057132mRNAPaHa08g11870.1
CDS
part_ofPaHa08g11870.1-CDS-8-1787993825:35057915..35058087mRNAPaHa08g11870.1
CDS
part_ofPaHa08g11870.1-CDS-8-1787993825:35058565..35058596mRNAPaHa08g11870.1
exon
part_ofPaHa08g11870.1-exon-8-1787993825:35052688..35052811mRNAPaHa08g11870.1
exon
part_ofPaHa08g11870.1-exon-8-1787993825:35052951..35053030mRNAPaHa08g11870.1
exon
part_ofPaHa08g11870.1-exon-8-1787993825:35056906..35057132mRNAPaHa08g11870.1
exon
part_ofPaHa08g11870.1-exon-8-1787993825:35057915..35058087mRNAPaHa08g11870.1
exon
part_ofPaHa08g11870.1-exon-8-1787993825:35058565..35058596mRNAPaHa08g11870.1
