Feature identity
- Identifier
- PaHa08g10530.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,064 bp
- Genomic location
- 8:23,751,941–23,761,725
- Strand
- −
Hass · mRNA
PaHa08g10530.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,064
- bp
- 8:23,751,941–23,761,725
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g10530
- eggNOG
- Preferred name: LOC100832047 | Seed ortholog: 337451.A0A3S3NRL5 | COG: S | eggNOG OG: Rad21_Rec8_N@131567|A-1*, Rad21_Rec8_N@2759|Ae-8, Rad21_Rec8_N@33090|NV-16, Rad21_Rec8_N@3398|SE-18
- Gene Ontology
- GO:0000278 mitotic cell cycle; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003674 molecular_function; GO:0003682 chromatin binding; GO:0003684 damaged DNA binding; GO:0003690 double-stranded DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0009555 pollen development; GO:0009561 megagametogenesis; GO:0019901 protein kinase binding; GO:0043565 sequence-specific DNA binding; GO:0061776 ATP-dependent topological DNA co-entrapment activity; GO:0106222 lncRNA binding; GO:0140297 DNA-binding transcription factor binding
- KEGG
- KO: K06670 | Pathway: 04110, 04111, 04113 | BRITE: 00001, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g10530.1-protein
derives_frommRNAPaHa08g10530.1
mRNAPaHa08g10530.1
part_ofgenePaHa08g10530
CDS
part_ofPaHa08g10530.1-CDS-8-1787993825:23751941..23752039mRNAPaHa08g10530.1
CDS
part_ofPaHa08g10530.1-CDS-8-1787993825:23753441..23753576mRNAPaHa08g10530.1
CDS
part_ofPaHa08g10530.1-CDS-8-1787993825:23753660..23753702mRNAPaHa08g10530.1
CDS
part_ofPaHa08g10530.1-CDS-8-1787993825:23753909..23753945mRNAPaHa08g10530.1
CDS
part_ofPaHa08g10530.1-CDS-8-1787993825:23757179..23757663mRNAPaHa08g10530.1
CDS
part_ofPaHa08g10530.1-CDS-8-1787993825:23757741..23757877mRNAPaHa08g10530.1
CDS
part_ofPaHa08g10530.1-CDS-8-1787993825:23760075..23760186mRNAPaHa08g10530.1
CDS
part_ofPaHa08g10530.1-CDS-8-1787993825:23760325..23760686mRNAPaHa08g10530.1
CDS
part_ofPaHa08g10530.1-CDS-8-1787993825:23760768..23760835mRNAPaHa08g10530.1
CDS
part_ofPaHa08g10530.1-CDS-8-1787993825:23760924..23761122mRNAPaHa08g10530.1
CDS
part_ofPaHa08g10530.1-CDS-8-1787993825:23761216..23761477mRNAPaHa08g10530.1
CDS
part_ofPaHa08g10530.1-CDS-8-1787993825:23761602..23761725mRNAPaHa08g10530.1
exon
part_ofPaHa08g10530.1-exon-8-1787993825:23751941..23752039mRNAPaHa08g10530.1
exon
part_ofPaHa08g10530.1-exon-8-1787993825:23753441..23753576mRNAPaHa08g10530.1
exon
part_ofPaHa08g10530.1-exon-8-1787993825:23753660..23753702mRNAPaHa08g10530.1
exon
part_ofPaHa08g10530.1-exon-8-1787993825:23753909..23753945mRNAPaHa08g10530.1
exon
part_ofPaHa08g10530.1-exon-8-1787993825:23757179..23757663mRNAPaHa08g10530.1
exon
part_ofPaHa08g10530.1-exon-8-1787993825:23757741..23757877mRNAPaHa08g10530.1
exon
part_ofPaHa08g10530.1-exon-8-1787993825:23760075..23760186mRNAPaHa08g10530.1
exon
part_ofPaHa08g10530.1-exon-8-1787993825:23760325..23760686mRNAPaHa08g10530.1
exon
part_ofPaHa08g10530.1-exon-8-1787993825:23760768..23760835mRNAPaHa08g10530.1
exon
part_ofPaHa08g10530.1-exon-8-1787993825:23760924..23761122mRNAPaHa08g10530.1
exon
part_ofPaHa08g10530.1-exon-8-1787993825:23761216..23761477mRNAPaHa08g10530.1
exon
part_ofPaHa08g10530.1-exon-8-1787993825:23761602..23761725mRNAPaHa08g10530.1
