Feature identity
- Identifier
- PaHa08g10180.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 921 bp
- Genomic location
- 8:22,294,167–22,326,794
- Strand
- −
Hass · mRNA
PaHa08g10180.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 921
- bp
- 8:22,294,167–22,326,794
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g10180
- eggNOG
- Preferred name: PP2A1 | Seed ortholog: 337451.A0A3S3MQF8 | COG: S | eggNOG OG: Metallophos@131567|AWl-19, Metallophos@2759|iSw-45, Metallophos@33090|pNi-48
- Gene Ontology
- GO:0004722 protein serine/threonine phosphatase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005777 peroxisome; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006470 protein dephosphorylation; GO:0009788 negative regulation of abscisic acid-activated signaling pathway; GO:0009903 chloroplast avoidance movement; GO:0032000 positive regulation of fatty acid beta-oxidation; GO:2000012 regulation of auxin polar transport
- KEGG
- EC: ec:3.1.3.16 | KO: K04382 | Pathway: 03015, 04136 | BRITE: 00001, 01000, 01009, 03019, 03036, 04131, 04147
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g10180.1-protein
derives_frommRNAPaHa08g10180.1
mRNAPaHa08g10180.1
part_ofgenePaHa08g10180
CDS
part_ofPaHa08g10180.1-CDS-8-1787993825:22294167..22294340mRNAPaHa08g10180.1
CDS
part_ofPaHa08g10180.1-CDS-8-1787993825:22294416..22294607mRNAPaHa08g10180.1
CDS
part_ofPaHa08g10180.1-CDS-8-1787993825:22299667..22299744mRNAPaHa08g10180.1
CDS
part_ofPaHa08g10180.1-CDS-8-1787993825:22299842..22299950mRNAPaHa08g10180.1
CDS
part_ofPaHa08g10180.1-CDS-8-1787993825:22308110..22308224mRNAPaHa08g10180.1
CDS
part_ofPaHa08g10180.1-CDS-8-1787993825:22326542..22326794mRNAPaHa08g10180.1
exon
part_ofPaHa08g10180.1-exon-8-1787993825:22294167..22294340mRNAPaHa08g10180.1
exon
part_ofPaHa08g10180.1-exon-8-1787993825:22294416..22294607mRNAPaHa08g10180.1
exon
part_ofPaHa08g10180.1-exon-8-1787993825:22299667..22299744mRNAPaHa08g10180.1
exon
part_ofPaHa08g10180.1-exon-8-1787993825:22299842..22299950mRNAPaHa08g10180.1
exon
part_ofPaHa08g10180.1-exon-8-1787993825:22308110..22308224mRNAPaHa08g10180.1
exon
part_ofPaHa08g10180.1-exon-8-1787993825:22326542..22326794mRNAPaHa08g10180.1
