Feature identity
- Identifier
- PaHa08g09900.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,434 bp
- Genomic location
- 8:21,241,248–21,276,422
- Strand
- −
Hass · mRNA
PaHa08g09900.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,434
- bp
- 8:21,241,248–21,276,422
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g09900
- eggNOG
- Preferred name: ROT3 | Seed ortholog: 337451.A0A3S3NHY9 | COG: COG2124 | eggNOG OG: p450@131567|E-3, p450@3398|BsN-19, p450@58023|Aja-17
- Gene Ontology
- GO:0008395 steroid hydroxylase activity; GO:0009507 chloroplast; GO:0009965 leaf morphogenesis; GO:0010268 brassinosteroid homeostasis; GO:0016132 brassinosteroid biosynthetic process; GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen; GO:0042814 monopolar cell growth; GO:0102097 22alpha-hydroxysteroid 23-monooxygenase activity
- KEGG
- EC: ec:1.14.14.147 | KO: K12637 | Pathway: 00905, 01100, 01110 | Module: M00371 | BRITE: 00001, 00199, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g09900.1-protein
derives_frommRNAPaHa08g09900.1
mRNAPaHa08g09900.1
part_ofgenePaHa08g09900
CDS
part_ofPaHa08g09900.1-CDS-8-1787993825:21241248..21241338mRNAPaHa08g09900.1
CDS
part_ofPaHa08g09900.1-CDS-8-1787993825:21242415..21242539mRNAPaHa08g09900.1
CDS
part_ofPaHa08g09900.1-CDS-8-1787993825:21267745..21267851mRNAPaHa08g09900.1
CDS
part_ofPaHa08g09900.1-CDS-8-1787993825:21268073..21268151mRNAPaHa08g09900.1
CDS
part_ofPaHa08g09900.1-CDS-8-1787993825:21268442..21268531mRNAPaHa08g09900.1
CDS
part_ofPaHa08g09900.1-CDS-8-1787993825:21268638..21268895mRNAPaHa08g09900.1
CDS
part_ofPaHa08g09900.1-CDS-8-1787993825:21268969..21269118mRNAPaHa08g09900.1
CDS
part_ofPaHa08g09900.1-CDS-8-1787993825:21270539..21270863mRNAPaHa08g09900.1
CDS
part_ofPaHa08g09900.1-CDS-8-1787993825:21276214..21276422mRNAPaHa08g09900.1
exon
part_ofPaHa08g09900.1-exon-8-1787993825:21241248..21241338mRNAPaHa08g09900.1
exon
part_ofPaHa08g09900.1-exon-8-1787993825:21242415..21242539mRNAPaHa08g09900.1
exon
part_ofPaHa08g09900.1-exon-8-1787993825:21267745..21267851mRNAPaHa08g09900.1
exon
part_ofPaHa08g09900.1-exon-8-1787993825:21268073..21268151mRNAPaHa08g09900.1
exon
part_ofPaHa08g09900.1-exon-8-1787993825:21268442..21268531mRNAPaHa08g09900.1
exon
part_ofPaHa08g09900.1-exon-8-1787993825:21268638..21268895mRNAPaHa08g09900.1
exon
part_ofPaHa08g09900.1-exon-8-1787993825:21268969..21269118mRNAPaHa08g09900.1
exon
part_ofPaHa08g09900.1-exon-8-1787993825:21270539..21270863mRNAPaHa08g09900.1
exon
part_ofPaHa08g09900.1-exon-8-1787993825:21276214..21276422mRNAPaHa08g09900.1
