Feature identity
- Identifier
- Pa12g1414.1-protein
- Feature type
- polypeptide
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,416 aa
- Genomic location
- Pa12:33,901,278–33,920,445
- Strand
- −
West Indian T2T · polypeptide
Pa12g1414.1-protein
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,416
- aa
- Pa12:33,901,278–33,920,445
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa12g1414
- eggNOG
- Preferred name: SYN4 | Seed ortholog: 337451.A0A443Q167 | COG: S | eggNOG OG: Rad21_Rec8@131567|AQ-7, Rad21_Rec8@33090|Ya-23, Rad21_Rec8_N@131567|A-1*, Rad21_Rec8_N@2759|Ae-8, Rad21_Rec8_N@33090|NW-16
- Gene Ontology
- GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003674 molecular_function; GO:0003682 chromatin binding; GO:0003684 damaged DNA binding; GO:0003690 double-stranded DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006302 double-strand break repair; GO:0007062 sister chromatid cohesion; GO:0019901 protein kinase binding; GO:0043565 sequence-specific DNA binding; GO:0061776 ATP-dependent topological DNA co-entrapment activity; GO:0070601 centromeric sister chromatid cohesion; GO:0106222 lncRNA binding; GO:0140297 DNA-binding transcription factor binding
- KEGG
- KO: K06670 | Pathway: 04110, 04111, 04113 | BRITE: 00001, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa12g1414.1-protein
derives_frommRNAPa12g1414.1
