Feature identity
- Identifier
- Pa01g0456.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,533 bp
- Genomic location
- Pa01:5,711,217–5,716,996
- Strand
- +
West Indian T2T · mRNA
Pa01g0456.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,533
- bp
- Pa01:5,711,217–5,716,996
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa01g0456
- eggNOG
- Preferred name: H0101F08.6 | Seed ortholog: 4432.A0A1U8BDF5 | COG: S | eggNOG OG: B3@131567|A-1*, B3@33090|AIM-20, B3@58023|Bms-27
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
- KEGG
- KO: K09287 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa01g0456.1-protein
derives_frommRNAPa01g0456.1
mRNAPa01g0456.1
part_ofgenePa01g0456
exon
part_ofPa01g0456.1:8mRNAPa01g0456.1
CDS
part_ofPa01g0456.1:cdsmRNAPa01g0456.1
exon
part_ofPa01g0456.2:1mRNAPa01g0456.1
exon
part_ofPa01g0456.2:2mRNAPa01g0456.1
exon
part_ofPa01g0456.2:3mRNAPa01g0456.1
exon
part_ofPa01g0456.2:4mRNAPa01g0456.1
exon
part_ofPa01g0456.2:5mRNAPa01g0456.1
exon
part_ofPa01g0456.2:6mRNAPa01g0456.1
exon
part_ofPa01g0456.2:7mRNAPa01g0456.1
