Feature identity
- Identifier
- Pa01g3792.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 630 bp
- Genomic location
- Pa01:87,205,929–87,207,240
- Strand
- −
West Indian T2T · mRNA
Pa01g3792.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 630
- bp
- Pa01:87,205,929–87,207,240
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa01g3792
- eggNOG
- Preferred name: BHLH10 | Seed ortholog: 337451.A0A3S3MWW2 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|CWr-25, HLH@33090|AAF-17, HLH@3398|DyB-28, HLH@35493|Aps-20
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0043068 positive regulation of programmed cell death; GO:0048658 anther wall tapetum development; GO:0052543 callose deposition in cell wall; GO:0070888 E-box binding
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa01g3792.1-protein
derives_frommRNAPa01g3792.1
mRNAPa01g3792.1
part_ofgenePa01g3792
exon
part_ofPa01g3792.1:1mRNAPa01g3792.1
exon
part_ofPa01g3792.1:2mRNAPa01g3792.1
exon
part_ofPa01g3792.1:3mRNAPa01g3792.1
CDS
part_ofPa01g3792.1:cdsmRNAPa01g3792.1
