Feature identity
- Identifier
- PaHa08g06050.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 564 bp
- Genomic location
- 8:10,429,587–10,432,288
- Strand
- +
Hass · mRNA
PaHa08g06050.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 564
- bp
- 8:10,429,587–10,432,288
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g06050
- eggNOG
- Preferred name: LOC116192389 | Seed ortholog: 337451.A0A3S3N3S3 | COG: S | eggNOG OG: Pyrophosphatase@131567|A-1, Pyrophosphatase@3398|AsP-27, Pyrophosphatase@35493|AiY-26
- Gene Ontology
- GO:0000287 magnesium ion binding; GO:0004427 inorganic diphosphate phosphatase activity; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005985 sucrose metabolic process; GO:0010581 regulation of starch biosynthetic process; GO:0019915 lipid storage; GO:0042546 cell wall biogenesis; GO:0071344 diphosphate metabolic process
- KEGG
- EC: ec:3.6.1.1 | KO: K01507 | Pathway: 00190 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g06050.1-protein
derives_frommRNAPaHa08g06050.1
mRNAPaHa08g06050.1
part_ofgenePaHa08g06050
CDS
part_ofPaHa08g06050.1-CDS-8-1787993825:10429587..10429635mRNAPaHa08g06050.1
CDS
part_ofPaHa08g06050.1-CDS-8-1787993825:10429726..10429754mRNAPaHa08g06050.1
CDS
part_ofPaHa08g06050.1-CDS-8-1787993825:10430528..10430593mRNAPaHa08g06050.1
CDS
part_ofPaHa08g06050.1-CDS-8-1787993825:10430843..10430950mRNAPaHa08g06050.1
CDS
part_ofPaHa08g06050.1-CDS-8-1787993825:10431333..10431398mRNAPaHa08g06050.1
CDS
part_ofPaHa08g06050.1-CDS-8-1787993825:10431474..10431594mRNAPaHa08g06050.1
CDS
part_ofPaHa08g06050.1-CDS-8-1787993825:10432046..10432127mRNAPaHa08g06050.1
CDS
part_ofPaHa08g06050.1-CDS-8-1787993825:10432246..10432288mRNAPaHa08g06050.1
exon
part_ofPaHa08g06050.1-exon-8-1787993825:10429587..10429635mRNAPaHa08g06050.1
exon
part_ofPaHa08g06050.1-exon-8-1787993825:10429726..10429754mRNAPaHa08g06050.1
exon
part_ofPaHa08g06050.1-exon-8-1787993825:10430528..10430593mRNAPaHa08g06050.1
exon
part_ofPaHa08g06050.1-exon-8-1787993825:10430843..10430950mRNAPaHa08g06050.1
exon
part_ofPaHa08g06050.1-exon-8-1787993825:10431333..10431398mRNAPaHa08g06050.1
exon
part_ofPaHa08g06050.1-exon-8-1787993825:10431474..10431594mRNAPaHa08g06050.1
exon
part_ofPaHa08g06050.1-exon-8-1787993825:10432046..10432127mRNAPaHa08g06050.1
exon
part_ofPaHa08g06050.1-exon-8-1787993825:10432246..10432288mRNAPaHa08g06050.1
