Feature identity
- Identifier
- PaHa08g05500.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 3,120 bp
- Genomic location
- 8:9,226,858–9,261,287
- Strand
- −
Hass · mRNA
PaHa08g05500.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 3,120
- bp
- 8:9,226,858–9,261,287
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g05500
- eggNOG
- Preferred name: LOC123091203 | Seed ortholog: 337451.A0A443PA57 | COG: S | eggNOG OG: TFIIIC_delta@2759|A-1, WD40@131567|ko-16, WD40@2759|ANH-18
- Gene Ontology
- GO:0000995 RNA polymerase III general transcription initiation factor activity; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006383 transcription by RNA polymerase III; GO:0006384 transcription initiation at RNA polymerase III promoter; GO:0008150 biological_process; GO:0036408 histone H3K14 acetyltransferase activity; GO:0042791 5S class rRNA transcription by RNA polymerase III; GO:0042797 tRNA transcription by RNA polymerase III; GO:0061733 protein-lysine-acetyltransferase activity
- KEGG
- EC: ec:2.3.1.48, ec:2.7.11.1, ec:3.2.1.50 | KO: K01205, K07204, K08333, K10260, K11127, K11310, K11803, K12857, K14299, K14793, K24738 | Pathway: 00531, 01100, 03013, 03040, 04120, 04136, 04140, 04142, 04150, 04213 | Module: M00078 | BRITE: 00001, 01000, 01001, 03009, 03019, 03021, 03032, 03036, 03041, 04121, 04131, 04147
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g05500.1-protein
derives_frommRNAPaHa08g05500.1
mRNAPaHa08g05500.1
part_ofgenePaHa08g05500
CDS
part_ofPaHa08g05500.1-CDS-8-1787993825:9226858..9226898mRNAPaHa08g05500.1
CDS
part_ofPaHa08g05500.1-CDS-8-1787993825:9228242..9228360mRNAPaHa08g05500.1
CDS
part_ofPaHa08g05500.1-CDS-8-1787993825:9229306..9230010mRNAPaHa08g05500.1
CDS
part_ofPaHa08g05500.1-CDS-8-1787993825:9230170..9230216mRNAPaHa08g05500.1
CDS
part_ofPaHa08g05500.1-CDS-8-1787993825:9230677..9230742mRNAPaHa08g05500.1
CDS
part_ofPaHa08g05500.1-CDS-8-1787993825:9230822..9230914mRNAPaHa08g05500.1
CDS
part_ofPaHa08g05500.1-CDS-8-1787993825:9240746..9240799mRNAPaHa08g05500.1
CDS
part_ofPaHa08g05500.1-CDS-8-1787993825:9240867..9241043mRNAPaHa08g05500.1
CDS
part_ofPaHa08g05500.1-CDS-8-1787993825:9241132..9241213mRNAPaHa08g05500.1
CDS
part_ofPaHa08g05500.1-CDS-8-1787993825:9250238..9250701mRNAPaHa08g05500.1
CDS
part_ofPaHa08g05500.1-CDS-8-1787993825:9250937..9251061mRNAPaHa08g05500.1
CDS
part_ofPaHa08g05500.1-CDS-8-1787993825:9252114..9252172mRNAPaHa08g05500.1
CDS
part_ofPaHa08g05500.1-CDS-8-1787993825:9253957..9254176mRNAPaHa08g05500.1
CDS
part_ofPaHa08g05500.1-CDS-8-1787993825:9254262..9254364mRNAPaHa08g05500.1
CDS
part_ofPaHa08g05500.1-CDS-8-1787993825:9254457..9254628mRNAPaHa08g05500.1
CDS
part_ofPaHa08g05500.1-CDS-8-1787993825:9257517..9257623mRNAPaHa08g05500.1
CDS
part_ofPaHa08g05500.1-CDS-8-1787993825:9257792..9257875mRNAPaHa08g05500.1
CDS
part_ofPaHa08g05500.1-CDS-8-1787993825:9259795..9259879mRNAPaHa08g05500.1
CDS
part_ofPaHa08g05500.1-CDS-8-1787993825:9260100..9260202mRNAPaHa08g05500.1
CDS
part_ofPaHa08g05500.1-CDS-8-1787993825:9260981..9261065mRNAPaHa08g05500.1
CDS
part_ofPaHa08g05500.1-CDS-8-1787993825:9261159..9261287mRNAPaHa08g05500.1
exon
part_ofPaHa08g05500.1-exon-8-1787993825:9226858..9226898mRNAPaHa08g05500.1
exon
part_ofPaHa08g05500.1-exon-8-1787993825:9228242..9228360mRNAPaHa08g05500.1
exon
part_ofPaHa08g05500.1-exon-8-1787993825:9229306..9230010mRNAPaHa08g05500.1
exon
part_ofPaHa08g05500.1-exon-8-1787993825:9230170..9230216mRNAPaHa08g05500.1
exon
part_ofPaHa08g05500.1-exon-8-1787993825:9230677..9230742mRNAPaHa08g05500.1
exon
part_ofPaHa08g05500.1-exon-8-1787993825:9230822..9230914mRNAPaHa08g05500.1
exon
part_ofPaHa08g05500.1-exon-8-1787993825:9240746..9240799mRNAPaHa08g05500.1
exon
part_ofPaHa08g05500.1-exon-8-1787993825:9240867..9241043mRNAPaHa08g05500.1
exon
part_ofPaHa08g05500.1-exon-8-1787993825:9241132..9241213mRNAPaHa08g05500.1
exon
part_ofPaHa08g05500.1-exon-8-1787993825:9250238..9250701mRNAPaHa08g05500.1
exon
part_ofPaHa08g05500.1-exon-8-1787993825:9250937..9251061mRNAPaHa08g05500.1
exon
part_ofPaHa08g05500.1-exon-8-1787993825:9252114..9252172mRNAPaHa08g05500.1
exon
part_ofPaHa08g05500.1-exon-8-1787993825:9253957..9254176mRNAPaHa08g05500.1
exon
part_ofPaHa08g05500.1-exon-8-1787993825:9254262..9254364mRNAPaHa08g05500.1
exon
part_ofPaHa08g05500.1-exon-8-1787993825:9254457..9254628mRNAPaHa08g05500.1
exon
part_ofPaHa08g05500.1-exon-8-1787993825:9257517..9257623mRNAPaHa08g05500.1
exon
part_ofPaHa08g05500.1-exon-8-1787993825:9257792..9257875mRNAPaHa08g05500.1
exon
part_ofPaHa08g05500.1-exon-8-1787993825:9259795..9259879mRNAPaHa08g05500.1
exon
part_ofPaHa08g05500.1-exon-8-1787993825:9260100..9260202mRNAPaHa08g05500.1
exon
part_ofPaHa08g05500.1-exon-8-1787993825:9260981..9261065mRNAPaHa08g05500.1
exon
part_ofPaHa08g05500.1-exon-8-1787993825:9261159..9261287mRNAPaHa08g05500.1
