Feature identity
- Identifier
- Pa02g1357.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 726 bp
- Genomic location
- Pa02:22,059,415–22,091,809
- Strand
- −
West Indian T2T · mRNA
Pa02g1357.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 726
- bp
- Pa02:22,059,415–22,091,809
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa02g1357
- eggNOG
- Preferred name: CMB1 | Seed ortholog: 337451.A0A3S3M410 | COG: S | eggNOG OG: K-box@131567|A-1*, K-box@2759|Ah-7, K-box@3398|bX-16, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3193|jV-20, SRF-TF@3398|DMa-32, SRF-TF@35493|bP-19
- Gene Ontology
- GO:0003677 DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008134 transcription factor binding; GO:0010022 meristem determinacy; GO:0010093 specification of floral organ identity; GO:0010582 floral meristem determinacy; GO:0046983 protein dimerization activity; GO:0048509 regulation of meristem development
- KEGG
- KO: K09264 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa02g1357.1-protein
derives_frommRNAPa02g1357.1
mRNAPa02g1357.1
part_ofgenePa02g1357
exon
part_ofPa02g1357.1:1mRNAPa02g1357.1
exon
part_ofPa02g1357.1:2mRNAPa02g1357.1
exon
part_ofPa02g1357.1:3mRNAPa02g1357.1
exon
part_ofPa02g1357.1:4mRNAPa02g1357.1
exon
part_ofPa02g1357.1:5mRNAPa02g1357.1
exon
part_ofPa02g1357.1:6mRNAPa02g1357.1
exon
part_ofPa02g1357.1:7mRNAPa02g1357.1
exon
part_ofPa02g1357.1:8mRNAPa02g1357.1
CDS
part_ofPa02g1357.1:cdsmRNAPa02g1357.1
