Feature identity
- Identifier
- Pa02g2975.3
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,047 bp
- Genomic location
- Pa02:75,809,214–75,814,299
- Strand
- −
West Indian T2T · mRNA
Pa02g2975.3
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,047
- bp
- Pa02:75,809,214–75,814,299
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa02g2975
- eggNOG
- Preferred name: NFYA1 | Seed ortholog: 337451.A0A443N5G6 | COG: S | eggNOG OG: CBFB_NFYA@2759|A-1, CBFB_NFYA@33090|AE-10
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0009793 embryo development ending in seed dormancy; GO:0010262 somatic embryogenesis; GO:0016602 CCAAT-binding factor complex; GO:0045892 negative regulation of DNA-templated transcription; GO:0048316 seed development; GO:0048510 regulation of timing of transition from vegetative to reproductive phase; GO:0055046 microgametogenesis
- KEGG
- KO: K08064 | Pathway: 04612, 05017, 05152 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa02g2975.3-protein
derives_frommRNAPa02g2975.3
exon
part_ofPa02g2975.2:1mRNAPa02g2975.3
exon
part_ofPa02g2975.2:2mRNAPa02g2975.3
exon
part_ofPa02g2975.2:3mRNAPa02g2975.3
exon
part_ofPa02g2975.2:5mRNAPa02g2975.3
mRNAPa02g2975.3
part_ofgenePa02g2975
exon
part_ofPa02g2975.3:7mRNAPa02g2975.3
CDS
part_ofPa02g2975.3:cdsmRNAPa02g2975.3
