Feature identity
- Identifier
- PaHa08g04610.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,397 bp
- Genomic location
- 8:7,869,162–7,875,191
- Strand
- +
Hass · mRNA
PaHa08g04610.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,397
- bp
- 8:7,869,162–7,875,191
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g04610
- eggNOG
- Preferred name: ANL2 | Seed ortholog: 337451.A0A3S3N3J7 | COG: S | eggNOG OG: Homeodomain@131567|Fe-12, Homeodomain@1437183|JKv-33, Homeodomain@3193|EBp-28, Homeodomain@3398|Erx-29, Homeodomain@35493|DQH-27, START@131567|e-5, START@2759|CM-9!, START@3398|AxM-24, START@35493|tP-19, START@58023|ACB-20
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009827 plant-type cell wall modification; GO:0010143 cutin biosynthetic process; GO:0030154 cell differentiation; GO:0042335 cuticle development; GO:0043481 anthocyanin accumulation in tissues in response to UV light; GO:0048364 root development; GO:0048497 maintenance of floral organ identity; GO:0048765 root hair cell differentiation
- KEGG
- KO: K09338 | Pathway: 04814 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g04610.1-protein
derives_frommRNAPaHa08g04610.1
mRNAPaHa08g04610.1
part_ofgenePaHa08g04610
CDS
part_ofPaHa08g04610.1-CDS-8-1787993825:7869162..7869320mRNAPaHa08g04610.1
CDS
part_ofPaHa08g04610.1-CDS-8-1787993825:7869443..7869654mRNAPaHa08g04610.1
CDS
part_ofPaHa08g04610.1-CDS-8-1787993825:7869757..7869874mRNAPaHa08g04610.1
CDS
part_ofPaHa08g04610.1-CDS-8-1787993825:7869970..7870644mRNAPaHa08g04610.1
CDS
part_ofPaHa08g04610.1-CDS-8-1787993825:7871138..7871239mRNAPaHa08g04610.1
CDS
part_ofPaHa08g04610.1-CDS-8-1787993825:7871363..7871575mRNAPaHa08g04610.1
CDS
part_ofPaHa08g04610.1-CDS-8-1787993825:7873493..7873667mRNAPaHa08g04610.1
CDS
part_ofPaHa08g04610.1-CDS-8-1787993825:7873748..7874115mRNAPaHa08g04610.1
CDS
part_ofPaHa08g04610.1-CDS-8-1787993825:7874817..7875191mRNAPaHa08g04610.1
exon
part_ofPaHa08g04610.1-exon-8-1787993825:7869162..7869320mRNAPaHa08g04610.1
exon
part_ofPaHa08g04610.1-exon-8-1787993825:7869443..7869654mRNAPaHa08g04610.1
exon
part_ofPaHa08g04610.1-exon-8-1787993825:7869757..7869874mRNAPaHa08g04610.1
exon
part_ofPaHa08g04610.1-exon-8-1787993825:7869970..7870644mRNAPaHa08g04610.1
exon
part_ofPaHa08g04610.1-exon-8-1787993825:7871138..7871239mRNAPaHa08g04610.1
exon
part_ofPaHa08g04610.1-exon-8-1787993825:7871363..7871575mRNAPaHa08g04610.1
exon
part_ofPaHa08g04610.1-exon-8-1787993825:7873493..7873667mRNAPaHa08g04610.1
exon
part_ofPaHa08g04610.1-exon-8-1787993825:7873748..7874115mRNAPaHa08g04610.1
exon
part_ofPaHa08g04610.1-exon-8-1787993825:7874817..7875191mRNAPaHa08g04610.1
