Feature identity
- Identifier
- PaHa08g03380.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 633 bp
- Genomic location
- 8:5,436,320–5,438,596
- Strand
- −
Hass · mRNA
PaHa08g03380.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 633
- bp
- 8:5,436,320–5,438,596
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g03380
- eggNOG
- Preferred name: YAB1 | Seed ortholog: 337451.A0A3S3NH32 | COG: S | eggNOG OG: YABBY@2759|C-2!, YABBY@3398|Cc-11
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009909 regulation of flower development; GO:0009933 meristem structural organization; GO:0009944 polarity specification of adaxial/abaxial axis; GO:0010093 specification of floral organ identity; GO:0010154 fruit development; GO:0010158 abaxial cell fate specification; GO:0010450 inflorescence meristem growth; GO:0045165 cell fate commitment; GO:0090706 specification of plant organ position; GO:1902183 regulation of shoot apical meristem development; GO:2000024 regulation of leaf development
- KEGG
- KO: K25796 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g03380.1-protein
derives_frommRNAPaHa08g03380.1
mRNAPaHa08g03380.1
part_ofgenePaHa08g03380
CDS
part_ofPaHa08g03380.1-CDS-8-1787993825:5436320..5436388mRNAPaHa08g03380.1
CDS
part_ofPaHa08g03380.1-CDS-8-1787993825:5436553..5436627mRNAPaHa08g03380.1
CDS
part_ofPaHa08g03380.1-CDS-8-1787993825:5436801..5436876mRNAPaHa08g03380.1
CDS
part_ofPaHa08g03380.1-CDS-8-1787993825:5437103..5437151mRNAPaHa08g03380.1
CDS
part_ofPaHa08g03380.1-CDS-8-1787993825:5437929..5438043mRNAPaHa08g03380.1
CDS
part_ofPaHa08g03380.1-CDS-8-1787993825:5438187..5438342mRNAPaHa08g03380.1
CDS
part_ofPaHa08g03380.1-CDS-8-1787993825:5438504..5438596mRNAPaHa08g03380.1
exon
part_ofPaHa08g03380.1-exon-8-1787993825:5436320..5436388mRNAPaHa08g03380.1
exon
part_ofPaHa08g03380.1-exon-8-1787993825:5436553..5436627mRNAPaHa08g03380.1
exon
part_ofPaHa08g03380.1-exon-8-1787993825:5436801..5436876mRNAPaHa08g03380.1
exon
part_ofPaHa08g03380.1-exon-8-1787993825:5437103..5437151mRNAPaHa08g03380.1
exon
part_ofPaHa08g03380.1-exon-8-1787993825:5437929..5438043mRNAPaHa08g03380.1
exon
part_ofPaHa08g03380.1-exon-8-1787993825:5438187..5438342mRNAPaHa08g03380.1
exon
part_ofPaHa08g03380.1-exon-8-1787993825:5438504..5438596mRNAPaHa08g03380.1
