Pa03g3227.2

West Indian T2T · mRNA

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

Record overview

Feature identity

Computational annotation

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: Pa03g3227

eggNOG: Preferred name: LOC101493317, LOC107933378 | Seed ortholog: 3983.A0A2C9URN2, 51240.A0A2I4EMK7 | COG: S | eggNOG OG: HA2@131567|Ay-8, HA2@1437183|Lys-43, HA2@2759|TJ-16, Helicase_C|KFC4E0@2759, Helicase_C|KFC4E0@3398, OB_NTP_bind@131567|C-2, OB_NTP_bind@2759|YK-17, OB_NTP_bind@3398|CUn-30
Gene Ontology: GO:0000182 rDNA binding; GO:0003723 RNA binding; GO:0003724 RNA helicase activity; GO:0003725 double-stranded RNA binding; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008186 ATP-dependent activity, acting on RNA; GO:0008380 RNA splicing; GO:0009793 embryo development ending in seed dormancy; GO:0016020 membrane; GO:0035194 regulatory ncRNA-mediated post-transcriptional gene silencing; GO:0038187 pattern recognition receptor activity; GO:0042802 identical protein binding; GO:0043023 ribosomal large subunit binding; GO:0043130 ubiquitin binding; GO:0060090 molecular adaptor activity; GO:0140297 DNA-binding transcription factor binding
KEGG: EC: ec:5.6.2.6 | KO: K12813 | Pathway: 03040 | BRITE: 00001, 01000, 03041

Biological context