Feature identity
- Identifier
- Pa03g3483.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 687 bp
- Genomic location
- Pa03:78,475,438–78,477,186
- Strand
- −
West Indian T2T · mRNA
Pa03g3483.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 687
- bp
- Pa03:78,475,438–78,477,186
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa03g3483
- eggNOG
- Preferred name: LOC104592471 | Seed ortholog: 337451.A0A3S3NY18 | COG: COG1398 | eggNOG OG: FA_desaturase@131567|h-6
- Gene Ontology
- GO:0005739 mitochondrion; GO:0005783 endoplasmic reticulum; GO:0005789 endoplasmic reticulum membrane; GO:0006636 unsaturated fatty acid biosynthetic process; GO:0009507 chloroplast; GO:0009579 thylakoid; GO:0010025 wax biosynthetic process; GO:0010114 response to red light; GO:0010205 photoinhibition; GO:0016215 acyl-CoA desaturase activity; GO:0042761 very long-chain fatty acid biosynthetic process; GO:0102843 palmitoyl-[glycerolipid] 7-desaturase activity
- KEGG
- EC: ec:1.14.19.42 | KO: K20416 | Pathway: 01040, 01100, 01212 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa03g3483.1-protein
derives_frommRNAPa03g3483.1
mRNAPa03g3483.1
part_ofgenePa03g3483
exon
part_ofPa03g3483.1:7mRNAPa03g3483.1
exon
part_ofPa03g3483.1:8mRNAPa03g3483.1
CDS
part_ofPa03g3483.1:cdsmRNAPa03g3483.1
exon
part_ofPa03g3483.2:1mRNAPa03g3483.1
exon
part_ofPa03g3483.2:2mRNAPa03g3483.1
exon
part_ofPa03g3483.2:3mRNAPa03g3483.1
exon
part_ofPa03g3483.2:4mRNAPa03g3483.1
exon
part_ofPa03g3483.2:6mRNAPa03g3483.1
