Feature identity
- Identifier
- PaHa08g02520.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 780 bp
- Genomic location
- 8:4,199,647–4,209,678
- Strand
- −
Hass · mRNA
PaHa08g02520.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 780
- bp
- 8:4,199,647–4,209,678
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g02520
- eggNOG
- Preferred name: FKBP20-2 | Seed ortholog: 337451.A0A3S3MPK0 | COG: S | eggNOG OG: FKBP_C@131567|JD-12, FKBP_C@33090|xi-21
- Gene Ontology
- GO:0003755 peptidyl-prolyl cis-trans isomerase activity; GO:0005576 extracellular region; GO:0009507 chloroplast; GO:0009543 chloroplast thylakoid lumen; GO:0009579 thylakoid; GO:0010207 photosystem II assembly; GO:0016491 oxidoreductase activity; GO:0031977 thylakoid lumen
- KEGG
- EC: ec:5.2.1.8 | KO: K01802 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g02520.1-protein
derives_frommRNAPaHa08g02520.1
mRNAPaHa08g02520.1
part_ofgenePaHa08g02520
CDS
part_ofPaHa08g02520.1-CDS-8-1787993825:4199647..4199766mRNAPaHa08g02520.1
CDS
part_ofPaHa08g02520.1-CDS-8-1787993825:4200639..4200715mRNAPaHa08g02520.1
CDS
part_ofPaHa08g02520.1-CDS-8-1787993825:4200798..4200906mRNAPaHa08g02520.1
CDS
part_ofPaHa08g02520.1-CDS-8-1787993825:4201179..4201288mRNAPaHa08g02520.1
CDS
part_ofPaHa08g02520.1-CDS-8-1787993825:4208396..4208622mRNAPaHa08g02520.1
CDS
part_ofPaHa08g02520.1-CDS-8-1787993825:4208735..4208831mRNAPaHa08g02520.1
CDS
part_ofPaHa08g02520.1-CDS-8-1787993825:4209639..4209678mRNAPaHa08g02520.1
exon
part_ofPaHa08g02520.1-exon-8-1787993825:4199647..4199766mRNAPaHa08g02520.1
exon
part_ofPaHa08g02520.1-exon-8-1787993825:4200639..4200715mRNAPaHa08g02520.1
exon
part_ofPaHa08g02520.1-exon-8-1787993825:4200798..4200906mRNAPaHa08g02520.1
exon
part_ofPaHa08g02520.1-exon-8-1787993825:4201179..4201288mRNAPaHa08g02520.1
exon
part_ofPaHa08g02520.1-exon-8-1787993825:4208396..4208622mRNAPaHa08g02520.1
exon
part_ofPaHa08g02520.1-exon-8-1787993825:4208735..4208831mRNAPaHa08g02520.1
exon
part_ofPaHa08g02520.1-exon-8-1787993825:4209639..4209678mRNAPaHa08g02520.1
