Feature identity
- Identifier
- PaHa08g02340.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 627 bp
- Genomic location
- 8:3,890,049–3,890,675
- Strand
- +
Hass · mRNA
PaHa08g02340.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 627
- bp
- 8:3,890,049–3,890,675
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g02340
- eggNOG
- Preferred name: LOC109001542 | Seed ortholog: 337451.A0A443P9G6 | COG: S | eggNOG OG: zf-CCCH_4@131567|A-1*, zf-CCCH_4@2759|AB-6
- Gene Ontology
- GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003723 RNA binding; GO:0003727 single-stranded RNA binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0061157 mRNA destabilization
- KEGG
- EC: ec:2.3.2.27 | KO: K23047 | Pathway: 03015 | BRITE: 00001, 01000, 04121
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g02340.1-protein
derives_frommRNAPaHa08g02340.1
mRNAPaHa08g02340.1
part_ofgenePaHa08g02340
CDS
part_ofPaHa08g02340.1-CDS-8-1787993825:3890049..3890675mRNAPaHa08g02340.1
exon
part_ofPaHa08g02340.1-exon-8-1787993825:3890049..3890675mRNAPaHa08g02340.1
