Feature identity
- Identifier
- Pa04g1997.2
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 2,868 bp
- Genomic location
- Pa04:43,697,483–43,707,754
- Strand
- +
West Indian T2T · mRNA
Pa04g1997.2
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,868
- bp
- Pa04:43,697,483–43,707,754
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa04g1997
- eggNOG
- Preferred name: NLP1 | Seed ortholog: 337451.A0A3S3NED0 | COG: S | eggNOG OG: PB1@131567|A-1*, PB1@1437183|AjO-26, PB1@2759|Al-8!, PB1@3193|sP-22, RWP-RK@131567|Fy-13, RWP-RK@33090|af-25
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010167 response to nitrate; GO:0042128 nitrate assimilation; GO:0090548 response to nitrate starvation; GO:0097009 energy homeostasis
- KEGG
- KO: K13422 | Pathway: 04016, 04075 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa04g1997.2-protein
derives_frommRNAPa04g1997.2
exon
part_ofPa04g1997.1:2mRNAPa04g1997.2
exon
part_ofPa04g1997.1:3mRNAPa04g1997.2
mRNAPa04g1997.2
part_ofgenePa04g1997
exon
part_ofPa04g1997.2:5mRNAPa04g1997.2
exon
part_ofPa04g1997.2:6mRNAPa04g1997.2
exon
part_ofPa04g1997.2:7mRNAPa04g1997.2
exon
part_ofPa04g1997.2:8mRNAPa04g1997.2
exon
part_ofPa04g1997.2:9mRNAPa04g1997.2
CDS
part_ofPa04g1997.2:cdsmRNAPa04g1997.2
