Feature identity
- Identifier
- PaHa08g02070.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 786 bp
- Genomic location
- 8:3,530,341–3,533,318
- Strand
- −
Hass · mRNA
PaHa08g02070.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 786
- bp
- 8:3,530,341–3,533,318
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g02070
- eggNOG
- Preferred name: LOC107912542 | Seed ortholog: 210143.A0A1R3JLF9 | COG: S | eggNOG OG: ECH_2@131567|A-1, ECH_2@2759|Cq-13, ECH_2@3398|aL-23
- Gene Ontology
- GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity; GO:0005739 mitochondrion; GO:0006574 L-valine catabolic process; GO:0006635 fatty acid beta-oxidation; GO:0009409 response to cold; GO:0009536 plastid; GO:0009733 response to auxin
- KEGG
- EC: ec:3.1.2.4 | KO: K05605 | Pathway: 00280, 00410, 00640, 01100, 01200 | Module: M00013 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g02070.1-protein
derives_frommRNAPaHa08g02070.1
mRNAPaHa08g02070.1
part_ofgenePaHa08g02070
CDS
part_ofPaHa08g02070.1-CDS-8-1787993825:3530341..3530484mRNAPaHa08g02070.1
CDS
part_ofPaHa08g02070.1-CDS-8-1787993825:3530572..3530613mRNAPaHa08g02070.1
CDS
part_ofPaHa08g02070.1-CDS-8-1787993825:3530715..3530816mRNAPaHa08g02070.1
CDS
part_ofPaHa08g02070.1-CDS-8-1787993825:3531517..3531616mRNAPaHa08g02070.1
CDS
part_ofPaHa08g02070.1-CDS-8-1787993825:3532242..3532363mRNAPaHa08g02070.1
CDS
part_ofPaHa08g02070.1-CDS-8-1787993825:3532629..3532714mRNAPaHa08g02070.1
CDS
part_ofPaHa08g02070.1-CDS-8-1787993825:3532936..3533020mRNAPaHa08g02070.1
CDS
part_ofPaHa08g02070.1-CDS-8-1787993825:3533214..3533318mRNAPaHa08g02070.1
exon
part_ofPaHa08g02070.1-exon-8-1787993825:3530341..3530484mRNAPaHa08g02070.1
exon
part_ofPaHa08g02070.1-exon-8-1787993825:3530572..3530613mRNAPaHa08g02070.1
exon
part_ofPaHa08g02070.1-exon-8-1787993825:3530715..3530816mRNAPaHa08g02070.1
exon
part_ofPaHa08g02070.1-exon-8-1787993825:3531517..3531616mRNAPaHa08g02070.1
exon
part_ofPaHa08g02070.1-exon-8-1787993825:3532242..3532363mRNAPaHa08g02070.1
exon
part_ofPaHa08g02070.1-exon-8-1787993825:3532629..3532714mRNAPaHa08g02070.1
exon
part_ofPaHa08g02070.1-exon-8-1787993825:3532936..3533020mRNAPaHa08g02070.1
exon
part_ofPaHa08g02070.1-exon-8-1787993825:3533214..3533318mRNAPaHa08g02070.1
