Pa09g0858.1

West Indian T2T · mRNA

Pa09g0858.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

2,550
bp
Pa09:19,270,268–19,289,718
genomic location
Record overview

Feature identity

Identifier
Pa09g0858.1
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
2,550 bp
Genomic location
Pa09:19,270,268–19,289,718
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: Pa09g0858

eggNOG
Preferred name: LOC108983431 | Seed ortholog: 337451.A0A443NCS0 | COG: S | eggNOG OG: Myb_DNA-bind_7@2759|A-1
Gene Ontology
GO:0000995 RNA polymerase III general transcription initiation factor activity; GO:0001006 RNA polymerase III type 3 promoter sequence-specific DNA binding; GO:0001112 DNA-templated transcription open complex formation; GO:0001156 TFIIIC-class transcription factor complex binding; GO:0003677 DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006383 transcription by RNA polymerase III; GO:0006384 transcription initiation at RNA polymerase III promoter; GO:0008150 biological_process; GO:0045945 positive regulation of transcription by RNA polymerase III; GO:0070898 RNA polymerase III preinitiation complex assembly
KEGG
EC: ec:5.2.1.8 | KO: K15198 | BRITE: 00001, 03021
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.

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