Feature identity
- Identifier
- PaHa08g01300.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 825 bp
- Genomic location
- 8:2,552,393–2,556,308
- Strand
- +
Hass · mRNA
PaHa08g01300.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 825
- bp
- 8:2,552,393–2,556,308
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g01300
- eggNOG
- Preferred name: WRKY12 | Seed ortholog: 337451.A0A3S3PBP6 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@2759|VE-17, WRKY@3398|fr-19
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009832 plant-type cell wall biogenesis; GO:0043565 sequence-specific DNA binding
- KEGG
- EC: ec:2.4.1.260 | KO: K03847 | Pathway: 00510, 00513, 01100 | Module: M00055 | BRITE: 00001, 01000, 01003
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g01300.1-protein
derives_frommRNAPaHa08g01300.1
mRNAPaHa08g01300.1
part_ofgenePaHa08g01300
CDS
part_ofPaHa08g01300.1-CDS-8-1787993825:2552393..2552488mRNAPaHa08g01300.1
CDS
part_ofPaHa08g01300.1-CDS-8-1787993825:2552609..2552944mRNAPaHa08g01300.1
CDS
part_ofPaHa08g01300.1-CDS-8-1787993825:2553063..2553130mRNAPaHa08g01300.1
CDS
part_ofPaHa08g01300.1-CDS-8-1787993825:2553577..2553738mRNAPaHa08g01300.1
CDS
part_ofPaHa08g01300.1-CDS-8-1787993825:2556146..2556308mRNAPaHa08g01300.1
exon
part_ofPaHa08g01300.1-exon-8-1787993825:2552393..2552488mRNAPaHa08g01300.1
exon
part_ofPaHa08g01300.1-exon-8-1787993825:2552609..2552944mRNAPaHa08g01300.1
exon
part_ofPaHa08g01300.1-exon-8-1787993825:2553063..2553130mRNAPaHa08g01300.1
exon
part_ofPaHa08g01300.1-exon-8-1787993825:2553577..2553738mRNAPaHa08g01300.1
exon
part_ofPaHa08g01300.1-exon-8-1787993825:2556146..2556308mRNAPaHa08g01300.1
