West Indian T2T · mRNA

Pa01g0060.2

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,398
bp
Pa01:830,305–834,881
genomic location
Record overview

Feature identity

Identifier
Pa01g0060.2
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
1,398 bp
Genomic location
Pa01:830,305–834,881
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC102721183 | Seed ortholog: 337451.A0A443NCC7 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AhC-29
Gene Ontology
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009553 embryo sac development; GO:0009554 megasporogenesis; GO:0009629 response to gravity; GO:0009733 response to auxin; GO:0009737 response to abscisic acid; GO:0009926 auxin polar transport; GO:0010052 guard cell differentiation; GO:0010235 guard mother cell cytokinesis; GO:0010376 stomatal complex formation; GO:0010444 guard mother cell differentiation; GO:0032875 regulation of DNA endoreduplication; GO:0043565 sequence-specific DNA binding; GO:0048527 lateral root development; GO:0050891 multicellular organismal-level water homeostasis; GO:0080022 primary root development; GO:0090436 leaf pavement cell development; GO:1901002 positive regulation of response to salt stress; GO:1901333 positive regulation of lateral root development; GO:1902584 positive regulation of response to water deprivation; GO:1902806 regulation of cell cycle G1/S phase transition; GO:2000037 regulation of stomatal complex patterning
KEGG
KO: K09422 | BRITE: 00001, 03000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.