Feature identity
- Identifier
- PaHa08g00990.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,367 bp
- Genomic location
- 8:1,469,513–1,483,601
- Strand
- −
Hass · mRNA
PaHa08g00990.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,367
- bp
- 8:1,469,513–1,483,601
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g00990
- eggNOG
- Preferred name: ROC3 | Seed ortholog: 337451.A0A3S3N8F3 | COG: S | eggNOG OG: Homeodomain@131567|Fe-12, Homeodomain@35493|Cjy-26, START@131567|e-5, START@2759|CM-9!, START@3398|eG-17, START@35493|Xd-16
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008150 biological_process; GO:0048497 maintenance of floral organ identity
- KEGG
- KO: K09338 | Pathway: 04814 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g00990.1-protein
derives_frommRNAPaHa08g00990.1
mRNAPaHa08g00990.1
part_ofgenePaHa08g00990
CDS
part_ofPaHa08g00990.1-CDS-8-1787993825:1469513..1469953mRNAPaHa08g00990.1
CDS
part_ofPaHa08g00990.1-CDS-8-1787993825:1470825..1470920mRNAPaHa08g00990.1
CDS
part_ofPaHa08g00990.1-CDS-8-1787993825:1472103..1472371mRNAPaHa08g00990.1
CDS
part_ofPaHa08g00990.1-CDS-8-1787993825:1473557..1473725mRNAPaHa08g00990.1
CDS
part_ofPaHa08g00990.1-CDS-8-1787993825:1479698..1479910mRNAPaHa08g00990.1
CDS
part_ofPaHa08g00990.1-CDS-8-1787993825:1480344..1480445mRNAPaHa08g00990.1
CDS
part_ofPaHa08g00990.1-CDS-8-1787993825:1481039..1481506mRNAPaHa08g00990.1
CDS
part_ofPaHa08g00990.1-CDS-8-1787993825:1482307..1482495mRNAPaHa08g00990.1
CDS
part_ofPaHa08g00990.1-CDS-8-1787993825:1482951..1483068mRNAPaHa08g00990.1
CDS
part_ofPaHa08g00990.1-CDS-8-1787993825:1483205..1483368mRNAPaHa08g00990.1
CDS
part_ofPaHa08g00990.1-CDS-8-1787993825:1483464..1483601mRNAPaHa08g00990.1
exon
part_ofPaHa08g00990.1-exon-8-1787993825:1469513..1469953mRNAPaHa08g00990.1
exon
part_ofPaHa08g00990.1-exon-8-1787993825:1470825..1470920mRNAPaHa08g00990.1
exon
part_ofPaHa08g00990.1-exon-8-1787993825:1472103..1472371mRNAPaHa08g00990.1
exon
part_ofPaHa08g00990.1-exon-8-1787993825:1473557..1473725mRNAPaHa08g00990.1
exon
part_ofPaHa08g00990.1-exon-8-1787993825:1479698..1479910mRNAPaHa08g00990.1
exon
part_ofPaHa08g00990.1-exon-8-1787993825:1480344..1480445mRNAPaHa08g00990.1
exon
part_ofPaHa08g00990.1-exon-8-1787993825:1481039..1481506mRNAPaHa08g00990.1
exon
part_ofPaHa08g00990.1-exon-8-1787993825:1482307..1482495mRNAPaHa08g00990.1
exon
part_ofPaHa08g00990.1-exon-8-1787993825:1482951..1483068mRNAPaHa08g00990.1
exon
part_ofPaHa08g00990.1-exon-8-1787993825:1483205..1483368mRNAPaHa08g00990.1
exon
part_ofPaHa08g00990.1-exon-8-1787993825:1483464..1483601mRNAPaHa08g00990.1
