Feature identity
- Identifier
- Pa01g0022.3
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,113 bp
- Genomic location
- Pa01:417,058–418,991
- Strand
- +
West Indian T2T · mRNA
Pa01g0022.3
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,113
- bp
- Pa01:417,058–418,991
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa01g0022
- eggNOG
- Preferred name: PHL8 | Seed ortholog: 337451.A0A3S3ML20 | COG: S | eggNOG OG: Myb_CC_LHEQLE@131567|A-1*, Myb_CC_LHEQLE@3193|a-8, Myb_CC_LHEQLE@33090|S-7, Myb_CC_LHEQLE@3398|Ae-11, Myb_DNA-binding@131567|dl-20, Myb_DNA-binding@2759|pK-22, Myb_DNA-binding@3193|Bsp-33, Myb_DNA-binding@33090|Apr-30, Myb_DNA-binding@3398|DaW-36
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
- KEGG
- EC: ec:6.3.4.5 | KO: K01940 | Pathway: 00220, 00250, 01100, 01110, 01230 | Module: M00029, M00844, M00845, M00978 | BRITE: 00001, 01000, 04147
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa01g0022.3-protein
derives_frommRNAPa01g0022.3
exon
part_ofPa01g0022.1:7mRNAPa01g0022.3
exon
part_ofPa01g0022.2:2mRNAPa01g0022.3
exon
part_ofPa01g0022.2:3mRNAPa01g0022.3
exon
part_ofPa01g0022.2:6mRNAPa01g0022.3
mRNAPa01g0022.3
part_ofgenePa01g0022
CDS
part_ofPa01g0022.3:cdsmRNAPa01g0022.3
exon
part_ofPa01g0022.4:8mRNAPa01g0022.3
exon
part_ofPa01g0022.4:9mRNAPa01g0022.3
