Feature identity
- Identifier
- PaHa08g00960.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 984 bp
- Genomic location
- 8:1,405,719–1,410,215
- Strand
- −
Hass · mRNA
PaHa08g00960.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 984
- bp
- 8:1,405,719–1,410,215
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g00960
- eggNOG
- Preferred name: KAN2 | Seed ortholog: 337451.A0A3S3NVB7 | COG: S | eggNOG OG: Myb_DNA-binding@131567|dl-20, Myb_DNA-binding@1437183|JmK-43, Myb_DNA-binding@2759|pK-22, Myb_DNA-binding@3193|App-30, Myb_DNA-binding@33090|Adt-29, Myb_DNA-binding@3398|DZh-36, Myb_DNA-binding@58023|Bsd-33
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009944 polarity specification of adaxial/abaxial axis; GO:0048440 carpel development; GO:0048481 plant ovule development
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g00960.1-protein
derives_frommRNAPaHa08g00960.1
mRNAPaHa08g00960.1
part_ofgenePaHa08g00960
CDS
part_ofPaHa08g00960.1-CDS-8-1787993825:1405719..1405835mRNAPaHa08g00960.1
CDS
part_ofPaHa08g00960.1-CDS-8-1787993825:1406590..1406650mRNAPaHa08g00960.1
CDS
part_ofPaHa08g00960.1-CDS-8-1787993825:1408266..1408398mRNAPaHa08g00960.1
CDS
part_ofPaHa08g00960.1-CDS-8-1787993825:1408488..1408533mRNAPaHa08g00960.1
CDS
part_ofPaHa08g00960.1-CDS-8-1787993825:1409382..1409458mRNAPaHa08g00960.1
CDS
part_ofPaHa08g00960.1-CDS-8-1787993825:1409666..1410215mRNAPaHa08g00960.1
exon
part_ofPaHa08g00960.1-exon-8-1787993825:1405719..1405835mRNAPaHa08g00960.1
exon
part_ofPaHa08g00960.1-exon-8-1787993825:1406590..1406650mRNAPaHa08g00960.1
exon
part_ofPaHa08g00960.1-exon-8-1787993825:1408266..1408398mRNAPaHa08g00960.1
exon
part_ofPaHa08g00960.1-exon-8-1787993825:1408488..1408533mRNAPaHa08g00960.1
exon
part_ofPaHa08g00960.1-exon-8-1787993825:1409382..1409458mRNAPaHa08g00960.1
exon
part_ofPaHa08g00960.1-exon-8-1787993825:1409666..1410215mRNAPaHa08g00960.1
