Feature identity
- Identifier
- Pa01g0048.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,128 bp
- Genomic location
- Pa01:701,056–702,183
- Strand
- +
West Indian T2T · mRNA
Pa01g0048.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,128
- bp
- Pa01:701,056–702,183
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa01g0048
- eggNOG
- Preferred name: LOC110806156 | Seed ortholog: 337451.A0A443NIQ2 | COG: S | eggNOG OG: TCP@131221|AC-7, TCP@131567|A-1*, TCP@2759|G-3, TCP@3193|ET-12, TCP@3398|Zw-20
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0009735 response to cytokinin; GO:0009737 response to abscisic acid; GO:0009739 response to gibberellin; GO:0010029 regulation of seed germination; GO:0010229 inflorescence development; GO:0031347 regulation of defense response; GO:0031540 regulation of anthocyanin biosynthetic process; GO:0042023 DNA endoreduplication; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0048467 gynoecium development; GO:0051301 cell division; GO:0080086 stamen filament development; GO:0140964 intracellular auxin homeostasis
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa01g0048.1-protein
derives_frommRNAPa01g0048.1
mRNAPa01g0048.1
part_ofgenePa01g0048
exon
part_ofPa01g0048.1:1mRNAPa01g0048.1
CDS
part_ofPa01g0048.1:cdsmRNAPa01g0048.1
