Feature identity
- Identifier
- Pa01g0918.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 2,190 bp
- Genomic location
- Pa01:12,570,517–12,573,240
- Strand
- +
West Indian T2T · mRNA
Pa01g0918.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,190
- bp
- Pa01:12,570,517–12,573,240
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa01g0918
- eggNOG
- Preferred name: SCR_2 | Seed ortholog: 337451.A0A3S3NGC7 | COG: S | eggNOG OG: GRAS@131567|n-8, GRAS@3193|NC-17, GRAS@3398|WW-19
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008356 asymmetric cell division; GO:0009630 gravitropism; GO:0009956 radial pattern formation; GO:0043565 sequence-specific DNA binding; GO:0045454 cell redox homeostasis; GO:0048364 root development; GO:0048366 leaf development; GO:0051457 maintenance of protein location in nucleus; GO:0090610 bundle sheath cell fate specification
- KEGG
- KO: K27742 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa01g0918.1-protein
derives_frommRNAPa01g0918.1
mRNAPa01g0918.1
part_ofgenePa01g0918
exon
part_ofPa01g0918.1:1mRNAPa01g0918.1
exon
part_ofPa01g0918.1:2mRNAPa01g0918.1
CDS
part_ofPa01g0918.1:cdsmRNAPa01g0918.1
