Feature identity
- Identifier
- Pa01g1031.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 825 bp
- Genomic location
- Pa01:14,374,133–14,377,223
- Strand
- −
West Indian T2T · mRNA
Pa01g1031.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 825
- bp
- Pa01:14,374,133–14,377,223
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa01g1031
- eggNOG
- Preferred name: LOC116201162 | Seed ortholog: 337451.A0A3S3Q5R5 | COG: S | eggNOG OG: Homeodomain@131567|RH-16, Homeodomain@2759|XV-17!, Homeodomain@33090|BEn-23, Homeodomain@3398|DCs-27
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0019827 stem cell population maintenance; GO:0045892 negative regulation of DNA-templated transcription; GO:0048653 anther development; GO:0080166 stomium development; GO:0090506 axillary shoot meristem initiation
- KEGG
- KO: K09299, K09357, K09378, K09379, K09380, K23560 | Pathway: 04550, 05202, 05206, 05215 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa01g1031.1-protein
derives_frommRNAPa01g1031.1
mRNAPa01g1031.1
part_ofgenePa01g1031
exon
part_ofPa01g1031.1:1mRNAPa01g1031.1
exon
part_ofPa01g1031.1:2mRNAPa01g1031.1
exon
part_ofPa01g1031.1:3mRNAPa01g1031.1
CDS
part_ofPa01g1031.1:cdsmRNAPa01g1031.1
