Feature identity
- Identifier
- PaHa07g31870.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,674 bp
- Genomic location
- 7:81,633,063–81,650,963
- Strand
- +
Hass · mRNA
PaHa07g31870.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,674
- bp
- 7:81,633,063–81,650,963
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa07g31870
- eggNOG
- Preferred name: MYB3R3 | Seed ortholog: 337451.A0A443P5Q2 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AWj-28, Myb_DNA-binding@2759|AhA-29
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006974 DNA damage response; GO:0008285 negative regulation of cell population proliferation; GO:0009409 response to cold; GO:0009723 response to ethylene; GO:0009733 response to auxin; GO:0009751 response to salicylic acid; GO:0009753 response to jasmonic acid; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription; GO:0045893 positive regulation of DNA-templated transcription; GO:0070176 DRM complex; GO:1901002 positive regulation of response to salt stress; GO:1902584 positive regulation of response to water deprivation
- KEGG
- KO: K09422 | Pathway: 04151, 04218 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa07g31870.1-protein
derives_frommRNAPaHa07g31870.1
mRNAPaHa07g31870.1
part_ofgenePaHa07g31870
CDS
part_ofPaHa07g31870.1-CDS-7-1787993825:81633063..81633095mRNAPaHa07g31870.1
CDS
part_ofPaHa07g31870.1-CDS-7-1787993825:81633748..81633764mRNAPaHa07g31870.1
CDS
part_ofPaHa07g31870.1-CDS-7-1787993825:81633873..81633935mRNAPaHa07g31870.1
CDS
part_ofPaHa07g31870.1-CDS-7-1787993825:81635281..81635332mRNAPaHa07g31870.1
CDS
part_ofPaHa07g31870.1-CDS-7-1787993825:81635447..81635504mRNAPaHa07g31870.1
CDS
part_ofPaHa07g31870.1-CDS-7-1787993825:81640308..81640402mRNAPaHa07g31870.1
CDS
part_ofPaHa07g31870.1-CDS-7-1787993825:81640500..81640603mRNAPaHa07g31870.1
CDS
part_ofPaHa07g31870.1-CDS-7-1787993825:81641391..81641519mRNAPaHa07g31870.1
CDS
part_ofPaHa07g31870.1-CDS-7-1787993825:81643993..81645020mRNAPaHa07g31870.1
CDS
part_ofPaHa07g31870.1-CDS-7-1787993825:81645094..81645175mRNAPaHa07g31870.1
CDS
part_ofPaHa07g31870.1-CDS-7-1787993825:81650951..81650963mRNAPaHa07g31870.1
exon
part_ofPaHa07g31870.1-exon-7-1787993825:81633063..81633095mRNAPaHa07g31870.1
exon
part_ofPaHa07g31870.1-exon-7-1787993825:81633748..81633764mRNAPaHa07g31870.1
exon
part_ofPaHa07g31870.1-exon-7-1787993825:81633873..81633935mRNAPaHa07g31870.1
exon
part_ofPaHa07g31870.1-exon-7-1787993825:81635281..81635332mRNAPaHa07g31870.1
exon
part_ofPaHa07g31870.1-exon-7-1787993825:81635447..81635504mRNAPaHa07g31870.1
exon
part_ofPaHa07g31870.1-exon-7-1787993825:81640308..81640402mRNAPaHa07g31870.1
exon
part_ofPaHa07g31870.1-exon-7-1787993825:81640500..81640603mRNAPaHa07g31870.1
exon
part_ofPaHa07g31870.1-exon-7-1787993825:81641391..81641519mRNAPaHa07g31870.1
exon
part_ofPaHa07g31870.1-exon-7-1787993825:81643993..81645020mRNAPaHa07g31870.1
exon
part_ofPaHa07g31870.1-exon-7-1787993825:81645094..81645175mRNAPaHa07g31870.1
exon
part_ofPaHa07g31870.1-exon-7-1787993825:81650951..81650963mRNAPaHa07g31870.1
