West Indian T2T · mRNA

Pa01g3190.2

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,344
bp
Pa01:78,769,127–78,773,945
genomic location
Record overview

Feature identity

Identifier
Pa01g3190.2
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
1,344 bp
Genomic location
Pa01:78,769,127–78,773,945
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: UNE10 | Seed ortholog: 337451.A0A3S3Q8G0 | COG: S | eggNOG OG: HLH@131221|BVX-22, HLH@131567|Zg-14!, HLH@3193|CEo-24, HLH@33090|AbI-19, HLH@3398|KBj-34, HLH@35493|AqB-20, HLH@58023|GdY-31
Gene Ontology
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006351 DNA-templated transcription; GO:0006355 regulation of DNA-templated transcription; GO:0009416 response to light stimulus; GO:0009506 plasmodesma; GO:0009567 double fertilization forming a zygote and endosperm; GO:0009637 response to blue light; GO:0009704 de-etiolation; GO:0009753 response to jasmonic acid; GO:0009845 seed germination; GO:0009959 negative gravitropism; GO:0010187 negative regulation of seed germination; GO:0010218 response to far red light; GO:0043565 sequence-specific DNA binding; GO:0090351 seedling development
KEGG
KO: K12126 | Pathway: 04075, 04712 | BRITE: 00001, 03000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.