Feature identity
- Identifier
- Pa01g3408.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 969 bp
- Genomic location
- Pa01:82,314,771–82,316,017
- Strand
- −
West Indian T2T · mRNA
Pa01g3408.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 969
- bp
- Pa01:82,314,771–82,316,017
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa01g3408
- eggNOG
- Preferred name: NAC043 | Seed ortholog: 337451.A0A3S5WGP8 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|om-16, NAM@3398|APz-19, NAM@35493|AE-6, NAM@58023|AGC-18
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009834 plant-type secondary cell wall biogenesis; GO:0010047 fruit dehiscence; GO:0042802 identical protein binding; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa01g3408.1-protein
derives_frommRNAPa01g3408.1
mRNAPa01g3408.1
part_ofgenePa01g3408
exon
part_ofPa01g3408.1:1mRNAPa01g3408.1
exon
part_ofPa01g3408.1:2mRNAPa01g3408.1
exon
part_ofPa01g3408.1:3mRNAPa01g3408.1
CDS
part_ofPa01g3408.1:cdsmRNAPa01g3408.1
