PaHa07g31610.1

Hass · mRNA

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,065: bp
7:81,090,074–81,107,938: genomic location

Record overview

Feature identity

Identifier: PaHa07g31610.1
Feature type: mRNA
Genome collection: Hass
Organism: Persea americana-Hass
Sequence length: 1,065 bp
Genomic location: 7:81,090,074–81,107,938
Strand: +

Open original Tripal record

Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: PaHa07g31610

eggNOG: Preferred name: LOC100837384 | Seed ortholog: 337451.A0A3S3MLY1 | COG: S | eggNOG OG: DP@2759|A-1, DP@33090|HU-19, E2F_TDP@131567|Ag-9, E2F_TDP@35493|Rr-23
Gene Ontology: GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006357 regulation of transcription by RNA polymerase II; GO:0006366 transcription by RNA polymerase II; GO:0006974 DNA damage response; GO:0007113 endomitotic cell cycle; GO:0007307 eggshell chorion gene amplification; GO:0007507 heart development; GO:0008069 dorsal/ventral axis specification, ovarian follicular epithelium; GO:0008406 gonad development; GO:0008544 epidermis development; GO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage; GO:0010628 positive regulation of gene expression; GO:0012501 programmed cell death; GO:0031507 heterochromatin formation; GO:0040027 negative regulation of vulval development; GO:0042659 regulation of cell fate specification; GO:0042981 regulation of apoptotic process; GO:0043276 anoikis; GO:0045476 nurse cell apoptotic process; GO:0045787 positive regulation of cell cycle; GO:0045850 positive regulation of nurse cell apoptotic process; GO:0045892 negative regulation of DNA-templated transcription; GO:0045893 positive regulation of DNA-templated transcription; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0046580 negative regulation of Ras protein signal transduction; GO:0046599 regulation of centriole replication; GO:0048477 oogenesis; GO:0051302 regulation of cell division; GO:0051726 regulation of cell cycle; GO:0070176 DRM complex; GO:0070345 negative regulation of fat cell proliferation; GO:1900087 positive regulation of G1/S transition of mitotic cell cycle; GO:2000134 negative regulation of G1/S transition of mitotic cell cycle; GO:2000278 regulation of DNA biosynthetic process
KEGG: KO: K04683 | Pathway: 03083 | BRITE: 00001, 03000, 03036

Biological context