Feature identity
- Identifier
- Pa01g3360.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 2,184 bp
- Genomic location
- Pa01:81,624,208–81,631,870
- Strand
- +
West Indian T2T · mRNA
Pa01g3360.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,184
- bp
- Pa01:81,624,208–81,631,870
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa01g3360
- eggNOG
- Preferred name: LHW | Seed ortholog: 337451.A0A443NQJ5 | COG: S | eggNOG OG: bHLH-MYC_N@131567|A-1*, bHLH-MYC_N@2759|B-2, bHLH-MYC_N@3193|m-7, bHLH-MYC_N@3398|AU-9
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0007140 male meiotic nuclear division; GO:0009507 chloroplast; GO:0010089 xylem development; GO:0048316 seed development; GO:0048364 root development; GO:0051321 meiotic cell cycle; GO:0071365 cellular response to auxin stimulus; GO:0090058 metaxylem development
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa01g3360.1-protein
derives_frommRNAPa01g3360.1
mRNAPa01g3360.1
part_ofgenePa01g3360
exon
part_ofPa01g3360.1:11mRNAPa01g3360.1
exon
part_ofPa01g3360.1:12mRNAPa01g3360.1
CDS
part_ofPa01g3360.1:cdsmRNAPa01g3360.1
exon
part_ofPa01g3360.2:1mRNAPa01g3360.1
exon
part_ofPa01g3360.2:10mRNAPa01g3360.1
exon
part_ofPa01g3360.2:2mRNAPa01g3360.1
exon
part_ofPa01g3360.2:3mRNAPa01g3360.1
exon
part_ofPa01g3360.2:4mRNAPa01g3360.1
exon
part_ofPa01g3360.2:5mRNAPa01g3360.1
exon
part_ofPa01g3360.2:7mRNAPa01g3360.1
exon
part_ofPa01g3360.2:8mRNAPa01g3360.1
exon
part_ofPa01g3360.2:9mRNAPa01g3360.1
