West Indian T2T · mRNA

Pa01g3503.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

975
bp
Pa01:83,662,067–83,668,508
genomic location
Record overview

Feature identity

Identifier
Pa01g3503.1
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
975 bp
Genomic location
Pa01:83,662,067–83,668,508
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: ASG4 | Seed ortholog: 337451.A0A3S5WGQ2 | COG: S | eggNOG OG: Myb_DNA-binding@131567|uI-23, Myb_DNA-binding@2759|yY-24, Myb_DNA-binding@33090|INd-41, Myb_DNA-binding@3398|PWh-47
Gene Ontology
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0007623 circadian rhythm; GO:0009637 response to blue light; GO:0010099 regulation of photomorphogenesis; GO:0010114 response to red light; GO:0032922 circadian regulation of gene expression; GO:0042752 regulation of circadian rhythm; GO:0043153 entrainment of circadian clock by photoperiod; GO:2000024 regulation of leaf development; GO:2000028 regulation of photoperiodism, flowering
KEGG
EC: ec:3.4.21.102 | KO: K03797, K11314, K12133, K12134, K15127 | Pathway: 04712 | BRITE: 00001, 01000, 01002, 03000, 03021, 03036
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.