Feature identity
- Identifier
- Pa01g3569.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,065 bp
- Genomic location
- Pa01:84,640,827–84,643,642
- Strand
- −
West Indian T2T · mRNA
Pa01g3569.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,065
- bp
- Pa01:84,640,827–84,643,642
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa01g3569
- eggNOG
- Preferred name: WRKY21 | Seed ortholog: 337451.A0A3S3MCD2 | COG: S | eggNOG OG: Plant_zn_clust@131567|A-1*, Plant_zn_clust@3193|I-4, Plant_zn_clust@3398|By-10, WRKY@131567|A-1*, WRKY@2759|CB-10, WRKY@3193|AGq-23, WRKY@33090|Ic-14, WRKY@3398|AOc-24
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0019760 glucosinolate metabolic process
- KEGG
- KO: K13425 | Pathway: 04016, 04626 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa01g3569.1-protein
derives_frommRNAPa01g3569.1
mRNAPa01g3569.1
part_ofgenePa01g3569
exon
part_ofPa01g3569.1:1mRNAPa01g3569.1
exon
part_ofPa01g3569.1:2mRNAPa01g3569.1
exon
part_ofPa01g3569.1:3mRNAPa01g3569.1
CDS
part_ofPa01g3569.1:cdsmRNAPa01g3569.1
