West Indian T2T · mRNA

Pa01g3587.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,260
bp
Pa01:84,918,399–84,937,915
genomic location
Record overview

Feature identity

Identifier
Pa01g3587.1
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
1,260 bp
Genomic location
Pa01:84,918,399–84,937,915
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: CPRF2 | Seed ortholog: 337451.A0A443NR21 | COG: S | eggNOG OG: bZIP_1@131567|iz-20, bZIP_1@35493|GAp-38, bZIP_C@131567|A-1*, bZIP_C@1437183|e-6, bZIP_C@35493|C-2
Gene Ontology
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009267 cellular response to starvation; GO:0009649 entrainment of circadian clock; GO:0019900 kinase binding; GO:0042802 identical protein binding; GO:0046982 protein heterodimerization activity; GO:0071215 cellular response to abscisic acid stimulus; GO:0071333 cellular response to glucose stimulus
KEGG
KO: K25784 | Pathway: 04022, 04024, 04148, 04151, 04152, 04211, 04261, 04380, 04612, 04668, 04710, 04713, 04714, 04725, 04728, 04911, 04915, 04916, 04918, 04922, 04924, 04925, 04926, 04927, 04928, 04931, 04934, 04935, 04962, 05016, 05020, 05030, 05031, 05034, 05152, 05161, 05163, 05165, 05166, 05167, 05202, 05203, 05207, 05215 | BRITE: 00001, 03000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.