West Indian T2T · mRNA

Pa02g0147.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,542
bp
Pa02:2,078,922–2,087,121
genomic location
Record overview

Feature identity

Identifier
Pa02g0147.1
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
1,542 bp
Genomic location
Pa02:2,078,922–2,087,121
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC109726622 | Seed ortholog: 337451.A0A3S3MDU4 | eggNOG OG: eIF2A@131567|B-2
Gene Ontology
GO:0000049 tRNA binding; GO:0002183 cytoplasmic translational initiation; GO:0003674 molecular_function; GO:0003729 mRNA binding; GO:0003743 translation initiation factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005576 extracellular region; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005850 eukaryotic translation initiation factor 2 complex; GO:0006412 translation; GO:0006413 translational initiation; GO:0006417 regulation of translation; GO:0006468 protein phosphorylation; GO:0007291 sperm individualization; GO:0008150 biological_process; GO:0009967 positive regulation of signal transduction; GO:0010608 post-transcriptional regulation of gene expression; GO:0010628 positive regulation of gene expression; GO:0017148 negative regulation of translation; GO:0022626 cytosolic ribosome; GO:0031981 nuclear lumen; GO:0032933 SREBP signaling pathway; GO:0042255 ribosome assembly; GO:0043022 ribosome binding; GO:0045296 cadherin binding; GO:0072562 blood microparticle; GO:1990928 response to amino acid starvation
KEGG
KO: K15026 | BRITE: 00001, 03012, 03019
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.