Feature identity
- Identifier
- PaHa07g29990.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,323 bp
- Genomic location
- 7:79,136,923–79,148,287
- Strand
- −
Hass · mRNA
PaHa07g29990.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,323
- bp
- 7:79,136,923–79,148,287
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa07g29990
- eggNOG
- Preferred name: E2FB | Seed ortholog: 337451.A0A443P591 | COG: S | eggNOG OG: E2F_CC-MB@131567|A-1*, E2F_CC-MB@2759|B-2, E2F_CC-MB@3398|IR-15, E2F_TDP@131567|Af-9, E2F_TDP@3193|bk-27
- Gene Ontology
- GO:0000902 cell morphogenesis; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0019760 glucosinolate metabolic process; GO:0042023 DNA endoreduplication; GO:0042770 signal transduction in response to DNA damage; GO:0043068 positive regulation of programmed cell death; GO:0046982 protein heterodimerization activity; GO:0051301 cell division; GO:0051782 negative regulation of cell division; GO:0070176 DRM complex
- KEGG
- KO: K06620 | Pathway: 01522, 03083, 04110, 04137, 04218, 04350, 04934, 05160, 05161, 05163, 05165, 05166, 05167, 05169, 05200, 05206, 05207, 05212, 05214, 05215, 05218, 05219, 05220, 05222, 05223, 05224, 05225, 05226 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa07g29990.1-protein
derives_frommRNAPaHa07g29990.1
mRNAPaHa07g29990.1
part_ofgenePaHa07g29990
CDS
part_ofPaHa07g29990.1-CDS-7-1787993825:79136923..79136960mRNAPaHa07g29990.1
CDS
part_ofPaHa07g29990.1-CDS-7-1787993825:79137382..79137448mRNAPaHa07g29990.1
CDS
part_ofPaHa07g29990.1-CDS-7-1787993825:79138160..79138394mRNAPaHa07g29990.1
CDS
part_ofPaHa07g29990.1-CDS-7-1787993825:79138511..79138587mRNAPaHa07g29990.1
CDS
part_ofPaHa07g29990.1-CDS-7-1787993825:79139209..79139274mRNAPaHa07g29990.1
CDS
part_ofPaHa07g29990.1-CDS-7-1787993825:79139388..79139436mRNAPaHa07g29990.1
CDS
part_ofPaHa07g29990.1-CDS-7-1787993825:79139557..79139607mRNAPaHa07g29990.1
CDS
part_ofPaHa07g29990.1-CDS-7-1787993825:79139685..79139737mRNAPaHa07g29990.1
CDS
part_ofPaHa07g29990.1-CDS-7-1787993825:79140483..79140537mRNAPaHa07g29990.1
CDS
part_ofPaHa07g29990.1-CDS-7-1787993825:79140635..79140723mRNAPaHa07g29990.1
CDS
part_ofPaHa07g29990.1-CDS-7-1787993825:79140855..79140940mRNAPaHa07g29990.1
CDS
part_ofPaHa07g29990.1-CDS-7-1787993825:79141041..79141097mRNAPaHa07g29990.1
CDS
part_ofPaHa07g29990.1-CDS-7-1787993825:79141204..79141396mRNAPaHa07g29990.1
CDS
part_ofPaHa07g29990.1-CDS-7-1787993825:79148081..79148287mRNAPaHa07g29990.1
exon
part_ofPaHa07g29990.1-exon-7-1787993825:79136923..79136960mRNAPaHa07g29990.1
exon
part_ofPaHa07g29990.1-exon-7-1787993825:79137382..79137448mRNAPaHa07g29990.1
exon
part_ofPaHa07g29990.1-exon-7-1787993825:79138160..79138394mRNAPaHa07g29990.1
exon
part_ofPaHa07g29990.1-exon-7-1787993825:79138511..79138587mRNAPaHa07g29990.1
exon
part_ofPaHa07g29990.1-exon-7-1787993825:79139209..79139274mRNAPaHa07g29990.1
exon
part_ofPaHa07g29990.1-exon-7-1787993825:79139388..79139436mRNAPaHa07g29990.1
exon
part_ofPaHa07g29990.1-exon-7-1787993825:79139557..79139607mRNAPaHa07g29990.1
exon
part_ofPaHa07g29990.1-exon-7-1787993825:79139685..79139737mRNAPaHa07g29990.1
exon
part_ofPaHa07g29990.1-exon-7-1787993825:79140483..79140537mRNAPaHa07g29990.1
exon
part_ofPaHa07g29990.1-exon-7-1787993825:79140635..79140723mRNAPaHa07g29990.1
exon
part_ofPaHa07g29990.1-exon-7-1787993825:79140855..79140940mRNAPaHa07g29990.1
exon
part_ofPaHa07g29990.1-exon-7-1787993825:79141041..79141097mRNAPaHa07g29990.1
exon
part_ofPaHa07g29990.1-exon-7-1787993825:79141204..79141396mRNAPaHa07g29990.1
exon
part_ofPaHa07g29990.1-exon-7-1787993825:79148081..79148287mRNAPaHa07g29990.1
