Feature identity
- Identifier
- PaHa07g29900.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 3,180 bp
- Genomic location
- 7:78,977,978–78,994,397
- Strand
- −
Hass · mRNA
PaHa07g29900.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 3,180
- bp
- 7:78,977,978–78,994,397
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa07g29900
- eggNOG
- Preferred name: ARF5 | Seed ortholog: 337451.A0A3S3QJ73 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|AW-7, AUX_IAA@3193|xV-20, AUX_IAA@3398|AEt-21, Auxin_resp@131221|y-7, Auxin_resp@131567|A-1*, Auxin_resp@2759|O-4, Auxin_resp@3193|AZ-8, Auxin_resp@3398|Bi-10, B3@131221|yd-19, B3@131567|A-1*, B3@3193|AqT-23, B3@33090|Id-12, B3@3398|BZe-26
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009733 response to auxin; GO:0009793 embryo development ending in seed dormancy; GO:0009908 flower development; GO:0009942 longitudinal axis specification; GO:0010051 xylem and phloem pattern formation; GO:0010305 leaf vascular tissue pattern formation; GO:0042802 identical protein binding; GO:0048364 root development; GO:0048507 meristem development
- KEGG
- KO: K14486 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa07g29900.1-protein
derives_frommRNAPaHa07g29900.1
mRNAPaHa07g29900.1
part_ofgenePaHa07g29900
CDS
part_ofPaHa07g29900.1-CDS-7-1787993825:78977978..78978128mRNAPaHa07g29900.1
CDS
part_ofPaHa07g29900.1-CDS-7-1787993825:78979549..78979739mRNAPaHa07g29900.1
CDS
part_ofPaHa07g29900.1-CDS-7-1787993825:78980229..78981868mRNAPaHa07g29900.1
CDS
part_ofPaHa07g29900.1-CDS-7-1787993825:78983552..78983687mRNAPaHa07g29900.1
CDS
part_ofPaHa07g29900.1-CDS-7-1787993825:78983769..78983844mRNAPaHa07g29900.1
CDS
part_ofPaHa07g29900.1-CDS-7-1787993825:78985581..78985703mRNAPaHa07g29900.1
CDS
part_ofPaHa07g29900.1-CDS-7-1787993825:78985875..78986039mRNAPaHa07g29900.1
CDS
part_ofPaHa07g29900.1-CDS-7-1787993825:78987460..78987550mRNAPaHa07g29900.1
CDS
part_ofPaHa07g29900.1-CDS-7-1787993825:78987759..78987843mRNAPaHa07g29900.1
CDS
part_ofPaHa07g29900.1-CDS-7-1787993825:78987944..78988096mRNAPaHa07g29900.1
CDS
part_ofPaHa07g29900.1-CDS-7-1787993825:78992979..78993035mRNAPaHa07g29900.1
CDS
part_ofPaHa07g29900.1-CDS-7-1787993825:78993134..78993232mRNAPaHa07g29900.1
CDS
part_ofPaHa07g29900.1-CDS-7-1787993825:78993925..78994037mRNAPaHa07g29900.1
CDS
part_ofPaHa07g29900.1-CDS-7-1787993825:78994298..78994397mRNAPaHa07g29900.1
exon
part_ofPaHa07g29900.1-exon-7-1787993825:78977978..78978128mRNAPaHa07g29900.1
exon
part_ofPaHa07g29900.1-exon-7-1787993825:78979549..78979739mRNAPaHa07g29900.1
exon
part_ofPaHa07g29900.1-exon-7-1787993825:78980229..78981868mRNAPaHa07g29900.1
exon
part_ofPaHa07g29900.1-exon-7-1787993825:78983552..78983687mRNAPaHa07g29900.1
exon
part_ofPaHa07g29900.1-exon-7-1787993825:78983769..78983844mRNAPaHa07g29900.1
exon
part_ofPaHa07g29900.1-exon-7-1787993825:78985581..78985703mRNAPaHa07g29900.1
exon
part_ofPaHa07g29900.1-exon-7-1787993825:78985875..78986039mRNAPaHa07g29900.1
exon
part_ofPaHa07g29900.1-exon-7-1787993825:78987460..78987550mRNAPaHa07g29900.1
exon
part_ofPaHa07g29900.1-exon-7-1787993825:78987759..78987843mRNAPaHa07g29900.1
exon
part_ofPaHa07g29900.1-exon-7-1787993825:78987944..78988096mRNAPaHa07g29900.1
exon
part_ofPaHa07g29900.1-exon-7-1787993825:78992979..78993035mRNAPaHa07g29900.1
exon
part_ofPaHa07g29900.1-exon-7-1787993825:78993134..78993232mRNAPaHa07g29900.1
exon
part_ofPaHa07g29900.1-exon-7-1787993825:78993925..78994037mRNAPaHa07g29900.1
exon
part_ofPaHa07g29900.1-exon-7-1787993825:78994298..78994397mRNAPaHa07g29900.1
