Feature identity
- Identifier
- PaHa07g28150.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 612 bp
- Genomic location
- 7:76,196,960–76,209,305
- Strand
- −
Hass · mRNA
PaHa07g28150.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 612
- bp
- 7:76,196,960–76,209,305
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa07g28150
- eggNOG
- Preferred name: LSD1 | Seed ortholog: 337451.A0A3S3QIX7 | COG: S | eggNOG OG: zf-LSD1@131567|X-5, zf-LSD1@2759|Aj-10, zf-LSD1@3398|At-11
- Gene Ontology
- GO:0000303 response to superoxide; GO:0001666 response to hypoxia; GO:0002240 response to molecule of oomycetes origin; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005576 extracellular region; GO:0009626 plant-type hypersensitive response; GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway; GO:0010104 regulation of ethylene-activated signaling pathway; GO:0010310 regulation of hydrogen peroxide metabolic process; GO:0010618 aerenchyma formation; GO:0043069 negative regulation of programmed cell death
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa07g28150.1-protein
derives_frommRNAPaHa07g28150.1
mRNAPaHa07g28150.1
part_ofgenePaHa07g28150
CDS
part_ofPaHa07g28150.1-CDS-7-1787993825:76196960..76197001mRNAPaHa07g28150.1
CDS
part_ofPaHa07g28150.1-CDS-7-1787993825:76197102..76197173mRNAPaHa07g28150.1
CDS
part_ofPaHa07g28150.1-CDS-7-1787993825:76197279..76197353mRNAPaHa07g28150.1
CDS
part_ofPaHa07g28150.1-CDS-7-1787993825:76197774..76197883mRNAPaHa07g28150.1
CDS
part_ofPaHa07g28150.1-CDS-7-1787993825:76199162..76199275mRNAPaHa07g28150.1
CDS
part_ofPaHa07g28150.1-CDS-7-1787993825:76203212..76203313mRNAPaHa07g28150.1
CDS
part_ofPaHa07g28150.1-CDS-7-1787993825:76207277..76207332mRNAPaHa07g28150.1
CDS
part_ofPaHa07g28150.1-CDS-7-1787993825:76209265..76209305mRNAPaHa07g28150.1
exon
part_ofPaHa07g28150.1-exon-7-1787993825:76196960..76197001mRNAPaHa07g28150.1
exon
part_ofPaHa07g28150.1-exon-7-1787993825:76197102..76197173mRNAPaHa07g28150.1
exon
part_ofPaHa07g28150.1-exon-7-1787993825:76197279..76197353mRNAPaHa07g28150.1
exon
part_ofPaHa07g28150.1-exon-7-1787993825:76197774..76197883mRNAPaHa07g28150.1
exon
part_ofPaHa07g28150.1-exon-7-1787993825:76199162..76199275mRNAPaHa07g28150.1
exon
part_ofPaHa07g28150.1-exon-7-1787993825:76203212..76203313mRNAPaHa07g28150.1
exon
part_ofPaHa07g28150.1-exon-7-1787993825:76207277..76207332mRNAPaHa07g28150.1
exon
part_ofPaHa07g28150.1-exon-7-1787993825:76209265..76209305mRNAPaHa07g28150.1
