West Indian T2T · mRNA

Pa02g3129.2

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

768
bp
Pa02:78,208,809–78,209,576
genomic location
Record overview

Feature identity

Identifier
Pa02g3129.2
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
768 bp
Genomic location
Pa02:78,208,809–78,209,576
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: NAC002 | Seed ortholog: 337451.A0A443PPR0 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|APl-19, NAM@3398|CHb-26, NAM@35493|AE-6
Gene Ontology
GO:0000976 transcription cis-regulatory region binding; GO:0001216 DNA-binding transcription activator activity; GO:0001666 response to hypoxia; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008361 regulation of cell size; GO:0009416 response to light stimulus; GO:0009507 chloroplast; GO:0009611 response to wounding; GO:0009620 response to fungus; GO:0009744 response to sucrose; GO:0009751 response to salicylic acid; GO:0009753 response to jasmonic acid; GO:0009788 negative regulation of abscisic acid-activated signaling pathway; GO:0009793 embryo development ending in seed dormancy; GO:0010099 regulation of photomorphogenesis; GO:0010150 leaf senescence; GO:0019760 glucosinolate metabolic process; GO:0019900 kinase binding; GO:0043424 protein histidine kinase binding; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription; GO:0045893 positive regulation of DNA-templated transcription; GO:0071456 cellular response to hypoxia; GO:1900057 positive regulation of leaf senescence; GO:1901002 positive regulation of response to salt stress; GO:1902890 regulation of root hair elongation
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.