Feature identity
- Identifier
- PaHa07g26830.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 393 bp
- Genomic location
- 7:74,309,486–74,316,449
- Strand
- −
Hass · mRNA
PaHa07g26830.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 393
- bp
- 7:74,309,486–74,316,449
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa07g26830
- eggNOG
- Preferred name: LOC109002522 | Seed ortholog: 337451.A0A443P4J8 | COG: S | eggNOG OG: Thioredoxin@131567|WD-15, Thioredoxin@2759|DHO-25
- Gene Ontology
- GO:0005515 protein binding; GO:0005739 mitochondrion; GO:0005759 mitochondrial matrix; GO:0005783 endoplasmic reticulum; GO:0005829 cytosol; GO:0006516 glycoprotein catabolic process; GO:0009507 chloroplast; GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor; GO:0036503 ERAD pathway; GO:0045454 cell redox homeostasis; GO:0048671 negative regulation of collateral sprouting
- KEGG
- EC: ec:3.5.1.52 | KO: K03671 | Pathway: 04141 | BRITE: 00001, 03110
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa07g26830.1-protein
derives_frommRNAPaHa07g26830.1
mRNAPaHa07g26830.1
part_ofgenePaHa07g26830
CDS
part_ofPaHa07g26830.1-CDS-7-1787993825:74309486..74309495mRNAPaHa07g26830.1
CDS
part_ofPaHa07g26830.1-CDS-7-1787993825:74310545..74310639mRNAPaHa07g26830.1
CDS
part_ofPaHa07g26830.1-CDS-7-1787993825:74312493..74312537mRNAPaHa07g26830.1
CDS
part_ofPaHa07g26830.1-CDS-7-1787993825:74315587..74315666mRNAPaHa07g26830.1
CDS
part_ofPaHa07g26830.1-CDS-7-1787993825:74316183..74316233mRNAPaHa07g26830.1
CDS
part_ofPaHa07g26830.1-CDS-7-1787993825:74316338..74316449mRNAPaHa07g26830.1
exon
part_ofPaHa07g26830.1-exon-7-1787993825:74309486..74309495mRNAPaHa07g26830.1
exon
part_ofPaHa07g26830.1-exon-7-1787993825:74310545..74310639mRNAPaHa07g26830.1
exon
part_ofPaHa07g26830.1-exon-7-1787993825:74312493..74312537mRNAPaHa07g26830.1
exon
part_ofPaHa07g26830.1-exon-7-1787993825:74315587..74315666mRNAPaHa07g26830.1
exon
part_ofPaHa07g26830.1-exon-7-1787993825:74316183..74316233mRNAPaHa07g26830.1
exon
part_ofPaHa07g26830.1-exon-7-1787993825:74316338..74316449mRNAPaHa07g26830.1
