Feature identity
- Identifier
- PaHa07g24030.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 606 bp
- Genomic location
- 7:69,274,011–69,278,618
- Strand
- −
Hass · mRNA
PaHa07g24030.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 606
- bp
- 7:69,274,011–69,278,618
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa07g24030
- eggNOG
- Preferred name: BBX19 | Seed ortholog: 337451.A0A3S3NDH5 | COG: S | eggNOG OG: zf-B_box@2759|B-2!, zf-B_box@33090|m-7
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0009640 photomorphogenesis; GO:0010100 negative regulation of photomorphogenesis; GO:0010228 vegetative to reproductive phase transition of meristem; GO:0070370 cellular heat acclimation; GO:0071483 cellular response to blue light
- KEGG
- KO: K12135 | Pathway: 04712 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa07g24030.1-protein
derives_frommRNAPaHa07g24030.1
mRNAPaHa07g24030.1
part_ofgenePaHa07g24030
CDS
part_ofPaHa07g24030.1-CDS-7-1787993825:69274011..69274027mRNAPaHa07g24030.1
CDS
part_ofPaHa07g24030.1-CDS-7-1787993825:69274867..69274935mRNAPaHa07g24030.1
CDS
part_ofPaHa07g24030.1-CDS-7-1787993825:69275033..69275243mRNAPaHa07g24030.1
CDS
part_ofPaHa07g24030.1-CDS-7-1787993825:69275339..69275457mRNAPaHa07g24030.1
CDS
part_ofPaHa07g24030.1-CDS-7-1787993825:69277032..69277128mRNAPaHa07g24030.1
CDS
part_ofPaHa07g24030.1-CDS-7-1787993825:69278526..69278618mRNAPaHa07g24030.1
exon
part_ofPaHa07g24030.1-exon-7-1787993825:69274011..69274027mRNAPaHa07g24030.1
exon
part_ofPaHa07g24030.1-exon-7-1787993825:69274867..69274935mRNAPaHa07g24030.1
exon
part_ofPaHa07g24030.1-exon-7-1787993825:69275033..69275243mRNAPaHa07g24030.1
exon
part_ofPaHa07g24030.1-exon-7-1787993825:69275339..69275457mRNAPaHa07g24030.1
exon
part_ofPaHa07g24030.1-exon-7-1787993825:69277032..69277128mRNAPaHa07g24030.1
exon
part_ofPaHa07g24030.1-exon-7-1787993825:69278526..69278618mRNAPaHa07g24030.1
