Feature identity
- Identifier
- Pa03g0971.2
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,107 bp
- Genomic location
- Pa03:15,396,143–15,397,249
- Strand
- +
West Indian T2T · mRNA
Pa03g0971.2
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,107
- bp
- Pa03:15,396,143–15,397,249
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa03g0971
- eggNOG
- Preferred name: RH21 | Seed ortholog: 4432.A0A1U7Z9U2 | COG: COG0513 | eggNOG OG: DEAD@131567|Fps-34!, DEAD@1437183|fDF-51, Helicase_C|B7RA0A@131567
- Gene Ontology
- GO:0000398 mRNA splicing, via spliceosome; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0035196 miRNA processing; GO:0140223 general transcription initiation factor activity
- KEGG
- EC: ec:5.6.2.7 | KO: K12858 | Pathway: 03040 | BRITE: 00001, 01000, 03041
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa03g0971.2-protein
derives_frommRNAPa03g0971.2
mRNAPa03g0971.2
part_ofgenePa03g0971
exon
part_ofPa03g0971.2:3mRNAPa03g0971.2
CDS
part_ofPa03g0971.2:cdsmRNAPa03g0971.2
