Feature identity
- Identifier
- PaHa07g23360.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,032 bp
- Genomic location
- 7:67,926,951–67,932,827
- Strand
- −
Hass · mRNA
PaHa07g23360.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,032
- bp
- 7:67,926,951–67,932,827
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa07g23360
- eggNOG
- Preferred name: LOC104223302 | Seed ortholog: 337451.A0A3S3QI49 | COG: S | eggNOG OG: MA3@131567|A-1*, MA3@2759|N-4, MIF4G@131567|A-1*, MIF4G@2759|BX-10
- Gene Ontology
- GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003674 molecular_function; GO:0003676 nucleic acid binding; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0006139 nucleobase-containing compound metabolic process; GO:0006412 translation; GO:0006972 hyperosmotic response; GO:0008150 biological_process; GO:0010608 post-transcriptional regulation of gene expression; GO:0016281 eukaryotic translation initiation factor 4F complex; GO:0042254 ribosome biogenesis; GO:0042274 ribosomal small subunit biogenesis; GO:0048820 hair follicle maturation; GO:0097078 FAL1-SGD1 complex
- KEGG
- KO: K17583 | BRITE: 00001, 01009
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa07g23360.1-protein
derives_frommRNAPaHa07g23360.1
mRNAPaHa07g23360.1
part_ofgenePaHa07g23360
CDS
part_ofPaHa07g23360.1-CDS-7-1787993825:67926951..67927334mRNAPaHa07g23360.1
CDS
part_ofPaHa07g23360.1-CDS-7-1787993825:67929791..67929913mRNAPaHa07g23360.1
CDS
part_ofPaHa07g23360.1-CDS-7-1787993825:67930623..67930916mRNAPaHa07g23360.1
CDS
part_ofPaHa07g23360.1-CDS-7-1787993825:67932446..67932547mRNAPaHa07g23360.1
CDS
part_ofPaHa07g23360.1-CDS-7-1787993825:67932699..67932827mRNAPaHa07g23360.1
exon
part_ofPaHa07g23360.1-exon-7-1787993825:67926951..67927334mRNAPaHa07g23360.1
exon
part_ofPaHa07g23360.1-exon-7-1787993825:67929791..67929913mRNAPaHa07g23360.1
exon
part_ofPaHa07g23360.1-exon-7-1787993825:67930623..67930916mRNAPaHa07g23360.1
exon
part_ofPaHa07g23360.1-exon-7-1787993825:67932446..67932547mRNAPaHa07g23360.1
exon
part_ofPaHa07g23360.1-exon-7-1787993825:67932699..67932827mRNAPaHa07g23360.1
