Feature identity
- Identifier
- Pa03g2460.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,224 bp
- Genomic location
- Pa03:63,193,522–63,210,240
- Strand
- −
West Indian T2T · mRNA
Pa03g2460.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,224
- bp
- Pa03:63,193,522–63,210,240
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa03g2460
- eggNOG
- Preferred name: ATR3, SWEETIE | Seed ortholog: 3476.A0A2P5DY49, 4432.A0A1U8A9H1, 56857.A0A200PTB4 | COG: S | eggNOG OG: FAD_binding_1@131567|N-4, Flavodoxin_1@131567|Aw-10, Flavodoxin_1@2759|Gl-14, NAD_binding_1@131567|Ip-13, NAD_binding_1@2759|PH-15
- Gene Ontology
- GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0009793 embryo development ending in seed dormancy; GO:0016651 oxidoreductase activity, acting on NAD(P)H
- KEGG
- EC: ec:1.6.2.4 | KO: K00327 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa03g2460.1-protein
derives_frommRNAPa03g2460.1
mRNAPa03g2460.1
part_ofgenePa03g2460
exon
part_ofPa03g2460.1:1mRNAPa03g2460.1
exon
part_ofPa03g2460.1:2mRNAPa03g2460.1
exon
part_ofPa03g2460.1:3mRNAPa03g2460.1
exon
part_ofPa03g2460.1:4mRNAPa03g2460.1
exon
part_ofPa03g2460.1:5mRNAPa03g2460.1
exon
part_ofPa03g2460.1:6mRNAPa03g2460.1
exon
part_ofPa03g2460.1:7mRNAPa03g2460.1
CDS
part_ofPa03g2460.1:cdsmRNAPa03g2460.1
